RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 MARK2Q7KZI7 788 aaKnown RBP9.36□□□□□ -0.91
DDX41-209ENST00000508279 LYSMD3Q7Z3D4 306 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 TECPR1Q7Z6L1 1165 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 SLC35F3Q8IY50 421 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 FSTL5Q8N475 847 aaPredicted RBP9.36□□□□□ -0.91
DDX41-209ENST00000508279 SLC25A41Q8N5S1 370 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 FAM181AQ8N9Y4 354 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 KYQ8NBH2 561 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 FAM46DQ8NEK8 389 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 CCL4L1Q8NHW4 92 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 HTR3CQ8WXA8 447 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 SPOCK2Q92563 424 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 IMP4Q96G21 291 aaKnown RBP9.36□□□□□ -0.91
DDX41-209ENST00000508279 TEKT5Q96M29 485 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 AGAP2Q99490 1192 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 RIOK2Q9BVS4 552 aaKnown RBP9.36□□□□□ -0.91
DDX41-209ENST00000508279 TMEM121BQ9BXQ6 578 aaPredicted RBP9.36□□□□□ -0.91
DDX41-209ENST00000508279 OSBPL8Q9BZF1 889 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 GPR63Q9BZJ6 419 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 CCDC86Q9H6F5 360 aaKnown RBP9.36□□□□□ -0.91
DDX41-209ENST00000508279 KCTD5Q9NXV2 234 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 PKD2L2Q9NZM6 624 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 RSPH14Q9UHP6 348 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 DNPEPQ9ULA0 475 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 SUFUQ9UMX1 484 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 GUCA1BQ9UMX6 200 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 CLCA2Q9UQC9 943 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 TMEM98Q9Y2Y6 226 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 GPSM3Q9Y4H4 160 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 AK5Q9Y6K8 562 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 U3KQA8 63 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 KIF26BQ2KJY2 2108 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 FAM221BA6H8Z2 402 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 HACD1B0YJ81 288 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 APOC4-APOC2K7ER74 178 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 MTSS1O43312 755 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 OPA1O60313 960 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 MT-CO3P00414 261 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 APOC2P02655 101 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 PYGMP11217 842 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 RBL1P28749 1068 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 CD68P34810 354 aaPredicted RBP9.35□□□□□ -0.91
DDX41-209ENST00000508279 GSDMDP57764 484 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 EIF3EP60228 445 aaKnown RBP9.35□□□□□ -0.91
DDX41-209ENST00000508279 COPS2P61201 443 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 RPL26P61254 145 aaKnown RBP9.35□□□□□ -0.91
DDX41-209ENST00000508279 CYP4F3Q08477 520 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 WASHC5Q12768 1159 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 NOMO1Q15155 1222 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 PERM1Q5SV97 790 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 DARS2Q6PI48 645 aaKnown RBP9.35□□□□□ -0.91
DDX41-209ENST00000508279 SYCE1Q8N0S2 351 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 ZNF567Q8N184 647 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 UBL4BQ8N7F7 174 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 LRRC57Q8N9N7 239 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 IPMKQ8NFU5 416 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 ACTL9Q8TC94 416 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 PTCD2Q8WV60 388 aaKnown RBP9.35□□□□□ -0.91
DDX41-209ENST00000508279 ALG3Q92685 438 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 QKIQ96PU8 341 aaKnown RBP eCLIP9.35□□□□□ -0.91
DDX41-209ENST00000508279 FERMT1Q9BQL6 677 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 HERPUD2Q9BSE4 406 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 BOCQ9BWV1 1114 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 SPATA16Q9BXB7 569 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 TEX101Q9BY14 249 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 DPEP2Q9H4A9 486 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 ZFYVE1Q9HBF4 777 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 ARFGAP3Q9NP61 516 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 NCKIPSDQ9NZQ3 722 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 FAM153AQ9UHL3 310 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 PADI4Q9UM07 663 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 RPL26L1Q9UNX3 145 aaKnown RBP9.35□□□□□ -0.91
DDX41-209ENST00000508279 ZNF711Q9Y462 761 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 DGKBQ9Y6T7 804 aa9.35□□□□□ -0.91
DDX41-209ENST00000508279 CACNA1BQ00975 2339 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 SCN8AQ9UQD0 1980 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 EME2A4GXA9 379 aaPredicted RBP9.34□□□□□ -0.91
DDX41-209ENST00000508279 TMEM8BA6NDV4 472 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 GOLGA6L9A6NEM1 432 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 AGRPO00253 132 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 TNFRSF10CO14798 259 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 CASC3O15234 703 aaKnown RBP9.34□□□□□ -0.91
DDX41-209ENST00000508279 KCNN4O15554 427 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 KRT37O76014 449 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 TJP3O95049 919 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 NDST3O95803 873 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 SOD1P00441 154 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 ATP1A1P05023 1023 aaKnown RBP9.34□□□□□ -0.91
DDX41-209ENST00000508279 CEACAM5P06731 702 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 HOXC4P09017 264 aaPredicted RBP9.34□□□□□ -0.91
DDX41-209ENST00000508279 AK4P27144 223 aaPredicted RBP9.34□□□□□ -0.91
DDX41-209ENST00000508279 SPINT3P49223 89 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 PPM1FP49593 454 aaPredicted RBP9.34□□□□□ -0.91
DDX41-209ENST00000508279 WNT3AP56704 352 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 DPTQ07507 201 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 ILF3Q12906 894 aaKnown RBP eCLIP9.34□□□□□ -0.91
DDX41-209ENST00000508279 BIRC2Q13490 618 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 SLC30A9Q6PML9 568 aa9.34□□□□□ -0.91
DDX41-209ENST00000508279 CDKL3Q8IVW4 592 aaPredicted RBP9.34□□□□□ -0.91
DDX41-209ENST00000508279 SFTPA2Q8IWL1 248 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms