RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 GOLGA8OA6NCC3 632 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 GOLGA8NF8WBI6 632 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 H3BMM5 538 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 NRG2O14511 850 aaPredicted RBP17.6■□□□□ 0.41
SFXN1-208ENST00000507823 NDUFS3O75489 264 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 MT-CO1P00395 513 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 SLC4A1P02730 911 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 C8AP07357 584 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 THRAP10827 490 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 ITGAXP20702 1163 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 ABL2P42684 1182 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 ACTR3P61158 418 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 PDAP1Q13442 181 aaKnown RBP17.6■□□□□ 0.41
SFXN1-208ENST00000507823 OR4D1Q15615 310 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 BBS7Q8IWZ6 715 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 MAB21L3Q8N8X9 362 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 RP9Q8TA86 221 aaKnown RBP17.6■□□□□ 0.41
SFXN1-208ENST00000507823 LENG8Q96PV6 779 aaPredicted RBP17.6■□□□□ 0.41
SFXN1-208ENST00000507823 ASB2Q96Q27 587 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 ZNF711Q9Y462 761 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 RGSL1A5PLK6 1076 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 PFDN6O15212 129 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 STX7O15400 261 aaKnown RBP17.6■□□□□ 0.41
SFXN1-208ENST00000507823 SMIM24O75264 130 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 HNRNPLP14866 589 aaKnown RBP eCLIP17.6■□□□□ 0.415e-33■■■■□ 19.7
SFXN1-208ENST00000507823 MC4RP32245 332 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 HMGCLP35914 325 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 EPHA5P54756 1037 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 SLC25A3Q00325 362 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 ACCSLQ4AC99 568 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 AARS2Q5JTZ9 985 aaKnown RBP17.6■□□□□ 0.41
SFXN1-208ENST00000507823 PSAPL1Q6NUJ1 521 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.6■□□□□ 0.41
SFXN1-208ENST00000507823 AFAP1L2Q8N4X5 818 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 KLHL23Q8NBE8 558 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 KREMEN2Q8NCW0 462 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 GRIN3AQ8TCU5 1115 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 SHCBP1LQ9BZQ2 653 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 TNFRSF12AQ9NP84 129 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 ABCB8Q9NUT2 735 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 KIAA1522Q9P206 1035 aaPredicted RBP17.6■□□□□ 0.41
SFXN1-208ENST00000507823 ARHGAP26Q9UNA1 814 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 SH3BP1Q9Y3L3 701 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 SCN8AQ9UQD0 1980 aa17.6■□□□□ 0.41
SFXN1-208ENST00000507823 MEI4A8MW99 385 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 TMEM233B4DJY2 109 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 SCAMP3O14828 347 aaKnown RBP17.59■□□□□ 0.41
SFXN1-208ENST00000507823 KERAO60938 352 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 SOCS5O75159 536 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 RHOBTB1O94844 696 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 PSMG1O95456 288 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 CXCL14O95715 111 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 CKMP06732 381 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 MXRA7P84157 204 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 ATXN7L2Q5T6C5 722 aaPredicted RBP17.59■□□□□ 0.41
SFXN1-208ENST00000507823 RTL10Q7L3V2 364 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 CEP70Q8NHQ1 597 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 SP7Q8TDD2 431 aaPredicted RBP17.59■□□□□ 0.41
SFXN1-208ENST00000507823 MYO19Q96H55 970 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 LZTS1Q9Y250 596 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 ZNF821O75541 412 aaPredicted RBP17.59■□□□□ 0.41
SFXN1-208ENST00000507823 SRP72O76094 671 aaKnown RBP17.59■□□□□ 0.41
SFXN1-208ENST00000507823 PKMP14618 531 aaKnown RBP17.59■□□□□ 0.41
SFXN1-208ENST00000507823 LMAN2Q12907 356 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 ARMC12Q5T9G4 340 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 PAQR3Q6TCH7 311 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 OTOP2Q7RTS6 562 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 DDI1Q8WTU0 396 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 VOPP1Q96AW1 172 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 EID2BQ96D98 161 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 PHF21BQ96EK2 531 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 PANX3Q96QZ0 392 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 ZBTB26Q9HCK0 441 aa17.59■□□□□ 0.41
SFXN1-208ENST00000507823 STX18Q9P2W9 335 aaKnown RBP17.59■□□□□ 0.41
SFXN1-208ENST00000507823 K7ERQ8 282 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 LEFTY2O00292 366 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 NEMP1O14524 444 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 UBFD1O14562 309 aaKnown RBP17.58■□□□□ 0.41
SFXN1-208ENST00000507823 KLK8O60259 260 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 CIB2O75838 187 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 FGF4P08620 206 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 HSPA1AP0DMV8 641 aaKnown RBP17.58■□□□□ 0.41
SFXN1-208ENST00000507823 HSPA1BP0DMV9 641 aaKnown RBP17.58■□□□□ 0.41
SFXN1-208ENST00000507823 FMO4P31512 558 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 CDKN1CP49918 316 aaPredicted RBP17.58■□□□□ 0.41
SFXN1-208ENST00000507823 PDCD2Q16342 344 aaPredicted RBP17.58■□□□□ 0.41
SFXN1-208ENST00000507823 CTSL3PQ5NE16 218 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 NECAB2Q7Z6G3 386 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 NKAPQ8N5F7 415 aaKnown RBP17.58■□□□□ 0.41
SFXN1-208ENST00000507823 CLPTM1LQ96KA5 538 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 C1QTNF3Q9BXJ4 246 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 SLC46A2Q9BY10 475 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 P2RY12Q9H244 342 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 GTSE1Q9NYZ3 720 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 PCDHB9Q9Y5E1 797 aa17.58■□□□□ 0.41
SFXN1-208ENST00000507823 TSPAN12O95859 305 aa17.58■□□□□ 0.4
SFXN1-208ENST00000507823 PYGLP06737 847 aa17.58■□□□□ 0.4
SFXN1-208ENST00000507823 PTGER3P43115 390 aa17.58■□□□□ 0.4
SFXN1-208ENST00000507823 NAA20P61599 178 aa17.58■□□□□ 0.4
SFXN1-208ENST00000507823 CDKN3Q16667 212 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms