RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 CDKN2AIPNLQ96HQ2 116 aa14.15□□□□□ -0.14
RNF4-208ENST00000507247 C19orf43Q9BQ61 176 aa14.15□□□□□ -0.14
RNF4-208ENST00000507247 GPR174Q9BXC1 333 aa14.15□□□□□ -0.14
RNF4-208ENST00000507247 C6orf106Q9H6K1 298 aaPredicted RBP14.15□□□□□ -0.14
RNF4-208ENST00000507247 FNDC3AQ9Y2H6 1198 aaKnown RBP14.15□□□□□ -0.14
RNF4-208ENST00000507247 CCDC163A0A0D9SF12 145 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 CCDC162PA2VCL2 907 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 LRRC72A6NJI9 287 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 H7C0S8 307 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 WNT9AO14904 365 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 GPR39O43194 453 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 RIPK2O43353 540 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 LZTS3O60299 673 aaPredicted RBP14.14□□□□□ -0.15
RNF4-208ENST00000507247 TM7SF2O76062 418 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 VAPBO95292 243 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 C1QAP02745 245 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 H2AFXP16104 143 aaPredicted RBP14.14□□□□□ -0.15
RNF4-208ENST00000507247 MAT2AP31153 395 aaKnown RBP14.14□□□□□ -0.15
RNF4-208ENST00000507247 CA5AP35218 305 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 SPAM1P38567 509 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 HADHAP40939 763 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 RPS21P63220 83 aaKnown RBP14.14□□□□□ -0.15
RNF4-208ENST00000507247 ZNF284Q2VY69 593 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 BEND6Q5SZJ8 279 aaPredicted RBP14.14□□□□□ -0.15
RNF4-208ENST00000507247 ALS2CLQ60I27 953 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 NEK5Q6P3R8 708 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 C3orf62Q6ZUJ4 267 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 TRMT10CQ7L0Y3 403 aaKnown RBP14.14□□□□□ -0.15
RNF4-208ENST00000507247 WDR5BQ86VZ2 330 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 TRIM69Q86WT6 500 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 PELI3Q8N2H9 469 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 SCAMP4Q969E2 229 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 NUS1Q96E22 293 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 TTC25Q96NG3 672 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 C1QTNF2Q9BXJ5 285 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 ABCG8Q9H221 673 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 VPS37BQ9H9H4 285 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 IL26Q9NPH9 171 aa14.14□□□□□ -0.15
RNF4-208ENST00000507247 NFKBIL1Q9UBC1 381 aaPredicted RBP14.14□□□□□ -0.15
RNF4-208ENST00000507247 WDFY4Q6ZS81 3184 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 TCRBV9S1A1TA0A576 114 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 GOLGA8KD6RF30 607 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 GOLGA8TH3BQL2 631 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 ERLIN1O75477 346 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 GOT2P00505 430 aaKnown RBP14.13□□□□□ -0.15
RNF4-208ENST00000507247 GSTA2P09210 222 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 PRSS56P0CW18 603 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 TSHRP16473 764 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 PAMP19021 973 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 BCKDHBP21953 392 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 MC4RP32245 332 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 FOXN2P32314 431 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 DCDC1P59894 354 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 PRAMEP78395 509 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 AGERQ15109 404 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 CHRNA6Q15825 494 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 LONRF1Q17RB8 773 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 HENMT1Q5T8I9 393 aaKnown RBP14.13□□□□□ -0.15
RNF4-208ENST00000507247 KIAA0895LQ68EN5 471 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 FBXO38Q6PIJ6 1188 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 FAM151BQ6UXP7 276 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 CYP2U1Q7Z449 544 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 KCNMB4Q86W47 210 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 RAVER1Q8IY67 606 aaKnown RBP14.13□□□□□ -0.15
RNF4-208ENST00000507247 NRSN1Q8IZ57 195 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 MREGQ8N565 214 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 TP53I13Q8NBR0 393 aaPredicted RBP14.13□□□□□ -0.15
RNF4-208ENST00000507247 UHMK1Q8TAS1 419 aaKnown RBP14.13□□□□□ -0.15
RNF4-208ENST00000507247 HNRNPLLQ8WVV9 542 aaKnown RBP14.13□□□□□ -0.15
RNF4-208ENST00000507247 UBLCP1Q8WVY7 318 aaPredicted RBP14.13□□□□□ -0.15
RNF4-208ENST00000507247 CERS2Q96G23 380 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 PLEKHG4BQ96PX9 1271 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 AGAP2Q99490 1192 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 FAM83DQ9H4H8 585 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 EBF2Q9HAK2 575 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 SMYD2Q9NRG4 433 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 MOCS1Q9NZB8 636 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 FBXO4Q9UKT5 387 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 THADAQ6YHU6 1953 aa14.13□□□□□ -0.15
RNF4-208ENST00000507247 ZDBF2Q9HCK1 2354 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 ABCA7Q8IZY2 2146 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 GLYATL1P3A0A0U1RQE8 302 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 RGSL1A5PLK6 1076 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 SPAG6O75602 509 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 PIAS1O75925 651 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 PAK4O96013 591 aaPredicted RBP14.12□□□□□ -0.15
RNF4-208ENST00000507247 IGHV4-34P06331 123 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 ERVK-10P10266 1014 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 HOXD11P31277 338 aaPredicted RBP14.12□□□□□ -0.15
RNF4-208ENST00000507247 HSD17B3P37058 310 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 CDKN1CP49918 316 aaPredicted RBP14.12□□□□□ -0.15
RNF4-208ENST00000507247 FRG1Q14331 258 aaKnown RBP14.12□□□□□ -0.15
RNF4-208ENST00000507247 SLC29A2Q14542 456 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 EFTUD2Q15029 972 aaKnown RBP eCLIP14.12□□□□□ -0.158e-8■■■□□ 18.1
RNF4-208ENST00000507247 WSCD2Q2TBF2 565 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 USP39Q53GS9 565 aaKnown RBP14.12□□□□□ -0.15
RNF4-208ENST00000507247 AFTPHQ6ULP2 937 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 ZNF765Q7L2R6 523 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 PTAR1Q7Z6K3 402 aaPredicted RBP14.12□□□□□ -0.15
RNF4-208ENST00000507247 LONP2Q86WA8 852 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms