RNA–Protein interactions for RNA: ENST00000507245.1

SMAD5-203, Transcript of SMAD family member 5, humanhuman

TSL 2

Gene SMAD5, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-203ENST00000507245 SLC11A1P49279 550 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 AARSP49588 968 aaKnown RBP eCLIP6.08□□□□□ -1.44
SMAD5-203ENST00000507245 EFNA5P52803 228 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 SLC12A3P55017 1021 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 CYP4F2P78329 520 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 HOXA4Q00056 320 aaPredicted RBP6.08□□□□□ -1.44
SMAD5-203ENST00000507245 PSG6Q00889 435 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 RNASELQ05823 741 aaKnown RBP6.08□□□□□ -1.44
SMAD5-203ENST00000507245 NCBP1Q09161 790 aaKnown RBP6.08□□□□□ -1.44
SMAD5-203ENST00000507245 SF3A3Q12874 501 aaKnown RBP eCLIP6.08□□□□□ -1.44
SMAD5-203ENST00000507245 NAB2Q15742 525 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 MAPK6Q16659 721 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 SPOUT1Q5T280 376 aaKnown RBP6.08□□□□□ -1.44
SMAD5-203ENST00000507245 OLFML1Q6UWY5 402 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 SERPINA13PQ6UXR4 307 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 THNSL1Q8IYQ7 743 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 VN1R2Q8NFZ6 395 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 OR6Y1Q8NGX8 325 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 URGCPQ8TCY9 931 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 SUSD6Q92537 303 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 CPB2Q96IY4 423 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 CCDC43Q96MW1 224 aaKnown RBP6.08□□□□□ -1.44
SMAD5-203ENST00000507245 TIMP4Q99727 224 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 PAAF1Q9BRP4 392 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 CCSER1Q9C0I3 900 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 NT5C3AQ9H0P0 336 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 NXF3Q9H4D5 531 aaKnown RBP6.08□□□□□ -1.44
SMAD5-203ENST00000507245 PDZD7Q9H5P4 517 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 SAP30LQ9HAJ7 183 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 ITM2CQ9NQX7 267 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 BLOC1S4Q9NUP1 217 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 MARCH5Q9NX47 278 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 NDUFAF4Q9P032 175 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 SH3BP4Q9P0V3 963 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 DNAJB4Q9UDY4 337 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 DAPP1Q9UN19 280 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 MTMR6Q9Y217 621 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 BDP1A6H8Y1 2624 aa6.08□□□□□ -1.44
SMAD5-203ENST00000507245 VWA3AA6NCI4 1184 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 TTC34A8MYJ7 566 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 PTGESO14684 152 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 MGST3O14880 152 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 ZC3H11AO75152 810 aaKnown RBP eCLIP6.07□□□□□ -1.44
SMAD5-203ENST00000507245 C1RP00736 705 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 HOXB8P17481 243 aaPredicted RBP6.07□□□□□ -1.44
SMAD5-203ENST00000507245 LONP1P36776 959 aaKnown RBP6.07□□□□□ -1.44
SMAD5-203ENST00000507245 MLH1P40692 756 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 NRIP1P48552 1158 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 ZNF131P52739 623 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 CFHR3Q02985 330 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 GRIK3Q13003 919 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 KLF10Q13118 480 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 PRPF4BQ13523 1007 aaKnown RBP6.07□□□□□ -1.44
SMAD5-203ENST00000507245 GIT2Q14161 759 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 SMC1AQ14683 1233 aaKnown RBP6.07□□□□□ -1.44
SMAD5-203ENST00000507245 TAF12Q16514 161 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 DCAF4L1Q3SXM0 396 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 RNASE12Q5GAN4 147 aaKnown RBP6.07□□□□□ -1.44
SMAD5-203ENST00000507245 XKR4Q5GH76 650 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 TMEM65Q6PI78 240 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 SYCE2Q6PIF2 218 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 ALKAL1Q6UXT8 129 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 TRIM72Q6ZMU5 477 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 RRAGAQ7L523 313 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 CDR2LQ86X02 465 aaPredicted RBP6.07□□□□□ -1.44
SMAD5-203ENST00000507245 ADHFE1Q8IWW8 467 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 OR52L2PQ8NGH6 319 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 GOLGA1Q92805 767 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 IFT74Q96LB3 600 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 FYTTD1Q96QD9 318 aaKnown RBP6.07□□□□□ -1.44
SMAD5-203ENST00000507245 SNX18Q96RF0 628 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 GAD1Q99259 594 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 THAP7Q9BT49 309 aaPredicted RBP6.07□□□□□ -1.44
SMAD5-203ENST00000507245 DDX23Q9BUQ8 820 aaKnown RBP6.07□□□□□ -1.44
SMAD5-203ENST00000507245 ADGRE3Q9BY15 652 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 S1PR5Q9H228 398 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 VPS16Q9H269 839 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 ZSCAN16Q9H4T2 348 aaPredicted RBP6.07□□□□□ -1.44
SMAD5-203ENST00000507245 TLE6Q9H808 572 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 VPS45Q9NRW7 570 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 ASB6Q9NWX5 421 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 CD207Q9UJ71 328 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 FBXO2Q9UK22 296 aaPredicted RBP6.07□□□□□ -1.44
SMAD5-203ENST00000507245 BAG5Q9UL15 447 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 ODF2LQ9ULJ1 636 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 TNFSF13BQ9Y275 285 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 HES2Q9Y543 173 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 SRPRBQ9Y5M8 271 aaKnown RBP6.07□□□□□ -1.44
SMAD5-203ENST00000507245 WNT6Q9Y6F9 365 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 TCHHQ07283 1943 aa6.07□□□□□ -1.44
SMAD5-203ENST00000507245 CCDC187A0A096LP49 1063 aa6.06□□□□□ -1.44
SMAD5-203ENST00000507245 CCDC189A1A4V9 331 aa6.06□□□□□ -1.44
SMAD5-203ENST00000507245 VPS37CA5D8V6 355 aaPredicted RBP6.06□□□□□ -1.44
SMAD5-203ENST00000507245 PI4K2BG5E9Z4 385 aa6.06□□□□□ -1.44
SMAD5-203ENST00000507245 H0Y3Z8 333 aa6.06□□□□□ -1.44
SMAD5-203ENST00000507245 TMEM189-UBE2V1I3L0A0 370 aa6.06□□□□□ -1.44
SMAD5-203ENST00000507245 K7ERI5 159 aa6.06□□□□□ -1.44
SMAD5-203ENST00000507245 PER2O15055 1255 aa6.06□□□□□ -1.44
SMAD5-203ENST00000507245 STX6O43752 255 aa6.06□□□□□ -1.44
SMAD5-203ENST00000507245 MT-CO3P00414 261 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms