RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 GPR150Q8NGU9 434 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 HMGB4Q8WW32 186 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 SCG3Q8WXD2 468 aaKnown RBP7.19□□□□□ -1.26
NUP54-204ENST00000506098 ASB12Q8WXK4 309 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 PBXIP1Q96AQ6 731 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 ZNF669Q96BR6 464 aaPredicted RBP7.19□□□□□ -1.26
NUP54-204ENST00000506098 ERLEC1Q96DZ1 483 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 CERS2Q96G23 380 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 CFAP36Q96G28 342 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 DNAJC1Q96KC8 554 aaKnown RBP7.19□□□□□ -1.26
NUP54-204ENST00000506098 TBATAQ96M53 351 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 PLEKHG4BQ96PX9 1271 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 TRIM56Q9BRZ2 755 aaKnown RBP7.19□□□□□ -1.26
NUP54-204ENST00000506098 SGK2Q9HBY8 427 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 PREBQ9HCU5 417 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 PRMT8Q9NR22 394 aaPredicted RBP7.19□□□□□ -1.26
NUP54-204ENST00000506098 RAD18Q9NS91 495 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 PKD2L2Q9NZM6 624 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 FETUBQ9UGM5 382 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 SLC2A6Q9UGQ3 507 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 GGT7Q9UJ14 662 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 RABGEF1Q9UJ41 708 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 PKP3Q9Y446 797 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 KCTD3Q9Y597 815 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.19□□□□□ -1.26
NUP54-204ENST00000506098 ARID1BQ8NFD5 2236 aaPredicted RBP7.19□□□□□ -1.26
NUP54-204ENST00000506098 CABIN1Q9Y6J0 2220 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 HEATR5BQ9P2D3 2071 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 SNRNP200O75643 2136 aaKnown RBP7.18□□□□□ -1.26
NUP54-204ENST00000506098 TRBV5-4A0A0C4DH59 114 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 TCRBV9S1A1TA0A576 114 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 CCDC189A1A4V9 331 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 FAM159BA6NKW6 160 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 A8MX80 341 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 BUD23O43709 281 aaKnown RBP7.18□□□□□ -1.26
NUP54-204ENST00000506098 TCEA3O75764 348 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 ACSL3O95573 720 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 TDGF1P13385 188 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 BPIP17213 487 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 STX2P32856 288 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 LIG3P49916 1009 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 ARSDP51689 593 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 ADPRHP54922 357 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 RPS21P63220 83 aaKnown RBP7.18□□□□□ -1.26
NUP54-204ENST00000506098 SEMG2Q02383 582 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 DPTQ07507 201 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 NAB1Q13506 487 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 PTPRCAPQ14761 206 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 STAT4Q14765 748 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 TMEM259Q4ZIN3 620 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 HENMT1Q5T8I9 393 aaKnown RBP7.18□□□□□ -1.26
NUP54-204ENST00000506098 TEDDM1Q5T9Z0 273 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 KIAA1161Q6NSJ0 714 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 KIAA1324Q6UXG2 1013 aaKnown RBP7.18□□□□□ -1.26
NUP54-204ENST00000506098 ARMCX6Q7L4S7 300 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 HSD11B1LQ7Z5J1 315 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 GALNT7Q86SF2 657 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 KCNMB4Q86W47 210 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 TRIM69Q86WT6 500 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 CNTN4Q8IWV2 1026 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 PIP4P2Q8N4L2 257 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 GPR26Q8NDV2 337 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 OR2T34Q8NGX1 318 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 OR4L1Q8NH43 312 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 OR14C36Q8NHC7 312 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 CALML6Q8TD86 181 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 CXorf40AQ8TE69 158 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 FBF1Q8TES7 1133 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 UBLCP1Q8WVY7 318 aaPredicted RBP7.18□□□□□ -1.26
NUP54-204ENST00000506098 HDAC10Q969S8 669 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 DTD2Q96FN9 168 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 HHIPQ96QV1 700 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 TMEM109Q9BVC6 243 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 C1QTNF2Q9BXJ5 285 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 BTBD1Q9H0C5 482 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 ACSS3Q9H6R3 686 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 VPS37BQ9H9H4 285 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 CD93Q9NPY3 652 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 SMYD2Q9NRG4 433 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 WSB2Q9NYS7 404 aaPredicted RBP7.18□□□□□ -1.26
NUP54-204ENST00000506098 APPL1Q9UKG1 709 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 ZFR2Q9UPR6 939 aaKnown RBP7.18□□□□□ -1.26
NUP54-204ENST00000506098 ITM2BQ9Y287 266 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 NFS1Q9Y697 457 aa7.18□□□□□ -1.26
NUP54-204ENST00000506098 IGHV1OR15-9A0A0B4J2B8 117 aa7.17□□□□□ -1.26
NUP54-204ENST00000506098 CCDC78A2IDD5 438 aa7.17□□□□□ -1.26
NUP54-204ENST00000506098 CCDC162PA2VCL2 907 aa7.17□□□□□ -1.26
NUP54-204ENST00000506098 LRRC72A6NJI9 287 aa7.17□□□□□ -1.26
NUP54-204ENST00000506098 NEMP1O14524 444 aa7.17□□□□□ -1.26
NUP54-204ENST00000506098 MAP2K7O14733 419 aa7.17□□□□□ -1.26
NUP54-204ENST00000506098 WNT9AO14904 365 aa7.17□□□□□ -1.26
NUP54-204ENST00000506098 LATO43561 262 aa7.17□□□□□ -1.26
NUP54-204ENST00000506098 MMP20O60882 483 aa7.17□□□□□ -1.26
NUP54-204ENST00000506098 RNGTTO60942 597 aaKnown RBP7.17□□□□□ -1.26
NUP54-204ENST00000506098 TM7SF2O76062 418 aa7.17□□□□□ -1.26
NUP54-204ENST00000506098 PCDH8O95206 1070 aa7.17□□□□□ -1.26
NUP54-204ENST00000506098 VAPBO95292 243 aa7.17□□□□□ -1.26
NUP54-204ENST00000506098 GOT2P00505 430 aaKnown RBP7.17□□□□□ -1.26
NUP54-204ENST00000506098 C6P13671 934 aa7.17□□□□□ -1.26
NUP54-204ENST00000506098 OGNP20774 298 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms