RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 CARD6Q9BX69 1037 aa4.23□□□□□ -1.73
CPNE4-204ENST00000505331 IKZF4Q9H2S9 585 aa4.23□□□□□ -1.73
CPNE4-204ENST00000505331 ZNF552Q9H707 407 aaPredicted RBP4.23□□□□□ -1.73
CPNE4-204ENST00000505331 PDE11AQ9HCR9 933 aa4.23□□□□□ -1.73
CPNE4-204ENST00000505331 NEUROD4Q9HD90 331 aa4.23□□□□□ -1.73
CPNE4-204ENST00000505331 ODF2LQ9ULJ1 636 aa4.23□□□□□ -1.73
CPNE4-204ENST00000505331 CITO14578 2027 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 VPS13CQ709C8 3753 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 FLNAP21333 2647 aaKnown RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 CTAGE15A4D2H0 777 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 AKR1B15C9JRZ8 316 aaPredicted RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 PPM1DO15297 605 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 POLR3GO15318 223 aaPredicted RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 ARHGEF9O43307 516 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 LEFTY1O75610 366 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 SASH3O75995 380 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 UNC5CO95185 931 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 ATE1O95260 518 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 CTDNEP1O95476 244 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 STAU1O95793 577 aaKnown RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 IGHEP01854 428 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 RAF1P04049 648 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 FGF1P05230 155 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 ANKRD34CP0C6C1 535 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 CTAGE8P0CG41 777 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 FGF5P12034 268 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 TIMP2P16035 220 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 TRIM21P19474 475 aaKnown RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 ADORA2BP29275 332 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 L1CAMP32004 1257 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 CA5AP35218 305 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 LMAN1P49257 510 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 PPM1FP49593 454 aaPredicted RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 GTF2A1P52655 376 aaPredicted RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 PLK1P53350 603 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 NKX6-1P78426 367 aaPredicted RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 PDE1BQ01064 536 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 APBA1Q02410 837 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 PTK2Q05397 1052 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 STK3Q13188 491 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 PEX6Q13608 980 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 INPP5AQ14642 412 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 TLR1Q15399 786 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 SURF1Q15526 300 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 SEPT7Q16181 437 aaKnown RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 RILPL1Q5EBL4 403 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 DNAJC21Q5F1R6 531 aaKnown RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 MS4A13Q5J8X5 152 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 LCE2CQ5TA81 110 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 IZUMO3Q5VZ72 239 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 RESP18Q5W5W9 173 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 KRT79Q5XKE5 535 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 CYB5D1Q6P9G0 228 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 PAMR1Q6UXH9 720 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 CTAGE6Q86UF2 777 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 TAX1BP1Q86VP1 789 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 CTAGE4Q8IX94 777 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 FAM186BQ8IYM0 893 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 CRYBG2Q8N1P7 616 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 CBARPQ8N350 705 aaPredicted RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 CIARTQ8N365 385 aaPredicted RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 GALNT16Q8N428 558 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 SH2D3CQ8N5H7 860 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 MYCT1Q8N699 235 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 DNAAF3Q8N9W5 541 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 TP53I13Q8NBR0 393 aaPredicted RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 CLEC1AQ8NC01 280 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 ANKRD20A12PQ8NF67 263 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 OR5B17Q8NGF7 314 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 GOT1L1Q8NHS2 421 aaPredicted RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 DNAJB14Q8TBM8 379 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 RNF139Q8WU17 664 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 ARHGEF26Q96DR7 871 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 RNF31Q96EP0 1072 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 PDXPQ96GD0 296 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 SCARF2Q96GP6 870 aaPredicted RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 FER1L6-AS2Q96M78 137 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 WDR92Q96MX6 357 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 OR6C1Q96RD1 312 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 NCAPGQ9BPX3 1015 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 MMTAG2Q9BU76 263 aaKnown RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 RAB34Q9BZG1 259 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 TMEM168Q9H0V1 697 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 CLEC4MQ9H2X3 399 aaPredicted RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 MBNL1Q9NR56 388 aaKnown RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 SPATS2LQ9NUQ6 558 aaKnown RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 ZNHIT6Q9NWK9 470 aaKnown RBP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.22□□□□□ -1.73
CPNE4-204ENST00000505331 IL36AQ9UHA7 158 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 SFMBT1Q9UHJ3 866 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 RSPH14Q9UHP6 348 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 SNX7Q9UNH6 387 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 JRKLQ9Y4A0 524 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 CSAG2Q9Y5P2 127 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 SLC30A1Q9Y6M5 507 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 RYR3Q15413 4870 aa4.22□□□□□ -1.73
CPNE4-204ENST00000505331 NPHP3-ACAD11A0A0J9YXS1 232 aa4.21□□□□□ -1.74
CPNE4-204ENST00000505331 A0A1B0GTH6 734 aa4.21□□□□□ -1.74
CPNE4-204ENST00000505331 A0A1B0GVL5 298 aa4.21□□□□□ -1.74
CPNE4-204ENST00000505331 LRRC10BA6NIK2 292 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms