RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SRRM1Q8IYB3 904 aaKnown RBP10.37□□□□□ -0.75
TPM3-217ENST00000504663 AADATQ8N5Z0 425 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 OR4L1Q8NH43 312 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 MDM1Q8TC05 714 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 ATXN2LQ8WWM7 1075 aaKnown RBP10.37□□□□□ -0.75
TPM3-217ENST00000504663 LPGAT1Q92604 370 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 MSANTD3Q96H12 275 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 MS4A3Q96HJ5 214 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 KLF6Q99612 283 aaPredicted RBP10.37□□□□□ -0.75
TPM3-217ENST00000504663 OLFM1Q99784 485 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 PRM3Q9NNZ6 103 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 SSU72Q9NP77 194 aaKnown RBP10.37□□□□□ -0.75
TPM3-217ENST00000504663 IL26Q9NPH9 171 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 PPANQ9NQ55 473 aaKnown RBP10.37□□□□□ -0.75
TPM3-217ENST00000504663 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.37□□□□□ -0.75
TPM3-217ENST00000504663 SERGEFQ9UGK8 458 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 SLC8A2Q9UPR5 921 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 COL6A3P12111 3177 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 C2orf72A6NCS6 295 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 A8MX80 341 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 POLR3GO15318 223 aaPredicted RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 STX7O15400 261 aaKnown RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 CD3EAPO15446 510 aaKnown RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 ADRB3P13945 408 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 HPDP32754 393 aaPredicted RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 ETV4P43268 484 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 PSMD8P48556 350 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 SPINT3P49223 89 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 WDR4P57081 412 aaKnown RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 RPS14P62263 151 aaKnown RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 SATB1Q01826 763 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 CREB5Q02930 508 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 DNAJC3Q13217 504 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 FZD5Q13467 585 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 MLF2Q15773 248 aaPredicted RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 PUS10Q3MIT2 529 aaKnown RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 SLC44A4Q53GD3 710 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 MROH9Q5TGP6 573 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 AGBL4Q5VU57 503 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 LIPIQ6XZB0 460 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 TECPR1Q7Z6L1 1165 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 MMAAQ8IVH4 418 aaKnown RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 ADHFE1Q8IWW8 467 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 GOLGA6L1Q8N7Z2 621 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 MAFAQ8NHW3 353 aaPredicted RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 FAM76AQ8TAV0 307 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 SCG3Q8WXD2 468 aaKnown RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 MTBPQ96DY7 904 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 ERLEC1Q96DZ1 483 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 COQ10AQ96MF6 247 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 SRPK1Q96SB4 655 aaKnown RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 C1QTNF1Q9BXJ1 281 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 HDAC8Q9BY41 377 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 GPR63Q9BZJ6 419 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 MKRN2Q9H000 416 aaKnown RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 SLC6A17Q9H1V8 727 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 C12orf65Q9H3J6 166 aaKnown RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 CAB39LQ9H9S4 337 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 NPDC1Q9NQX5 325 aaPredicted RBP10.36□□□□□ -0.75
TPM3-217ENST00000504663 SNX15Q9NRS6 342 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 CATSPERZQ9NTU4 200 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 NSMCE4AQ9NXX6 385 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 SENP1Q9P0U3 644 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 SUN2Q9UH99 717 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 EMCNQ9ULC0 261 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 GRID1Q9ULK0 1009 aa10.36□□□□□ -0.75
TPM3-217ENST00000504663 TRIOO75962 3097 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 TMEM120BA0PK00 339 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 KRBA1A5PL33 1030 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 GOLGA8RI6L899 631 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 KPNA3O00505 521 aaPredicted RBP10.35□□□□□ -0.75
TPM3-217ENST00000504663 MID1O15344 667 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 GALR2O43603 387 aaPredicted RBP10.35□□□□□ -0.75
TPM3-217ENST00000504663 SPAG7O75391 227 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 KRT37O76014 449 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 KRT38O76015 456 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 KLF8O95600 359 aaPredicted RBP10.35□□□□□ -0.75
TPM3-217ENST00000504663 SOD1P00441 154 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 DHRS4L1P0CG22 281 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 BRAFP15056 766 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 ZNF30P17039 623 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 KRT15P19012 456 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 KRT4P19013 534 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 CD72P21854 359 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 NTSR1P30989 418 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 SPRP35270 261 aaPredicted RBP10.35□□□□□ -0.75
TPM3-217ENST00000504663 SPAM1P38567 509 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 HADHAP40939 763 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 P2RY2P41231 377 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 CD151P48509 253 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 ATP1A2P50993 1020 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 SUOXP51687 545 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 SLC18A1P54219 525 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 TAS2R39P59534 338 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 DCDC1P59894 354 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 PRAMEP78395 509 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 PDE1BQ01064 536 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 PFKPQ01813 784 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 PPARDQ03181 441 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 CNTN1Q12860 1018 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms