RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PACS2Q86VP3 889 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 DCP2Q8IU60 420 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 BLOC1S5Q8TDH9 187 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 KLHDC7BQ96G42 594 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 KRT12Q99456 494 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 HINFPQ9BQA5 517 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 ZDHHC5Q9C0B5 715 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 CDH19Q9H159 772 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 ABCG8Q9H221 673 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 SMOC1Q9H4F8 434 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 PARD6AQ9NPB6 346 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 CASS4Q9NQ75 786 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 MBNL1Q9NR56 388 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 GPR27Q9NS67 375 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 RAD18Q9NS91 495 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 PKD2L2Q9NZM6 624 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 NFKBIL1Q9UBC1 381 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 CA5BQ9Y2D0 317 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 ANKRD6Q9Y2G4 727 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 MRFAP1Q9Y605 127 aa11.88□□□□□ -0.51
PDLIM5-208ENST00000504489 PIEZO1Q92508 2521 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 A0A1B0GVT2 93 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 C2orf81A6NN90 581 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 H0Y8X5 98 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 AP3B1O00203 1094 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 ZNF500O60304 480 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 PPFIA2O75334 1257 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 CRTAMO95727 393 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 HOXC4P09017 264 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 THEGLP0DJG4 465 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 TSHRP16473 764 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 LPOP22079 712 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 IVDP26440 423 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 TEAD1P28347 426 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 TRIM23P36406 574 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 PLA2G5P39877 138 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 CTSKP43235 329 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 RABIFP47224 123 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 DCDC1P59894 354 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 PDE1BQ01064 536 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 BNC1Q01954 994 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 INPP5AQ14642 412 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 KCNJ11Q14654 390 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 SF3A2Q15428 464 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 PNCKQ6P2M8 343 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 PPP1R21Q6ZMI0 780 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 Q6ZSR6 202 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 GLT6D1Q7Z4J2 308 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 MAATS1Q7Z4T9 603 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 JAMLQ86YT9 394 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 OR52K1Q8NGK4 314 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 CPT1BQ92523 772 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 AP2M1Q96CW1 435 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 FAM122AQ96E09 287 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 FAM83DQ9H4H8 585 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 ERVMER34-1Q9H9K5 563 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 IL17CQ9P0M4 197 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 ASIC3Q9UHC3 531 aa11.87□□□□□ -0.51
PDLIM5-208ENST00000504489 TCRBV7S3A2A0A539 114 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 LNP1A1A4G5 178 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 FAM187AA6NFU0 413 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 TTI1O43156 1089 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 LDB2O43679 373 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 PCCBP05166 539 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 PYGLP06737 847 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 BPIP17213 487 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 TPH1P17752 444 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 ADCY8P40145 1251 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 GRIA1P42261 906 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 NPY2RP49146 381 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 C21orf59P57076 290 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 NXPH1P58417 271 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 SARNPP82979 210 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 C2orf54Q08AI8 447 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 GRIK2Q13002 908 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 LAMB3Q13751 1172 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 KCTD19Q17RG1 926 aaPredicted RBP11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 HENMT1Q5T8I9 393 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 ZDHHC20Q5W0Z9 365 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 TCEAL6Q6IPX3 200 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 IL27RAQ6UWB1 636 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 LAYNQ6UX15 382 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 PRR23CQ6ZRP0 262 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 PTAR1Q7Z6K3 402 aaPredicted RBP11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 PCGF5Q86SE9 256 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 DNAAF3Q8N9W5 541 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 PLA2G15Q8NCC3 412 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 GPR26Q8NDV2 337 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 MCUQ8NE86 351 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 MNS1Q8NEH6 495 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 OR13H1Q8NG92 308 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 DTX3LQ8TDB6 740 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 SCAMP4Q969E2 229 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 TCEAL3Q969E4 200 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 PLEKHG4BQ96PX9 1271 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 RANBP9Q96S59 729 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 APOOQ9BUR5 198 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 CD84Q9UIB8 345 aa11.86□□□□□ -0.51
PDLIM5-208ENST00000504489 PKP3Q9Y446 797 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms