RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 FCGR1BQ92637 280 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 C12orf43Q96C57 262 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 OMA1Q96E52 524 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 AGAP4Q96P64 663 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 GCNAQ96QF7 691 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF670Q9BS34 389 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 KATNAL1Q9BW62 490 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 C1QTNF1Q9BXJ1 281 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RAB33BQ9H082 229 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SLC6A15Q9H2J7 730 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TMEM206Q9H813 350 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CAB39LQ9H9S4 337 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SPC25Q9HBM1 224 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 IARS2Q9NSE4 1012 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 DDX56Q9NY93 547 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ABCD2Q9UBJ2 740 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 WARS2Q9UGM6 360 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF221Q9UK13 617 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ASB4Q9Y574 426 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 POM121BA6NF01 834 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SPTLC1O15269 473 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PHGDHO43175 533 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 FBXO21O94952 628 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 C1QTNF9P0C862 333 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SMIM18P0DKX4 95 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RAG1P15918 1043 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SLC9A1P19634 815 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CLK1P49759 484 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ETV1P50549 477 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 KDSRQ06136 332 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 MGAT5Q09328 741 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 BST1Q10588 318 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 NFATC3Q12968 1075 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ART3Q13508 389 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SLC10A6Q3KNW5 377 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 FAM47AQ5JRC9 791 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CCNYL2Q5T2Q4 361 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PRPF39Q86UA1 669 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RETREG3Q86VR2 466 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 FAM20CQ8IXL6 584 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PPIL6Q8IXY8 311 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 KBTBD2Q8IY47 623 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 MYO1HQ8N1T3 1032 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 BANPQ8N9N5 519 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 KBTBD8Q8NFY9 601 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 LHFPL5Q8TAF8 219 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SLC35G2Q8TBE7 412 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SOCS4Q8WXH5 440 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 KLHL6Q8WZ60 621 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PROX1Q92786 737 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF486Q96H40 463 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 REXO5Q96IC2 774 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RIPOR3Q96MK2 946 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PSKH2Q96QS6 385 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CPXM1Q96SM3 734 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SLC25A23Q9BV35 468 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 C2orf49Q9BVC5 232 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ZBTB3Q9H5J0 574 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 OCEL1Q9H607 264 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RPRD1BQ9NQG5 326 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 NECTIN3Q9NQS3 549 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RGS18Q9NS28 235 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 KCNH7Q9NS40 1196 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.79□□□□□ -1.965e-6■■■■□ 20.5
NEDD4-204ENST00000503468 APEX2Q9UBZ4 518 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 IPO11Q9UI26 975 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 IPPQ9Y573 584 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PCDHA10Q9Y5I2 948 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CEPT1Q9Y6K0 416 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 FER1L5A0AVI2 2057 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 EFCAB10A6NFE3 127 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 NPIPB15A6NHN6 443 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 WDR64B1ANS9 1081 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 HDAC3O15379 428 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 MAGEB3O15480 346 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 DTNBO60941 627 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PRKD3O94806 890 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 EPN2O95208 641 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 CAPN1P07384 714 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 MAPK4P31152 587 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 GMPRP36959 345 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 MFAP3P55082 362 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 UBE3AQ05086 875 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 MTAPQ13126 283 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 IKBKEQ14164 716 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 DOC2BQ14184 412 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 SQLEQ14534 574 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ZFP69Q49AA0 526 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 RUNDC3AQ59EK9 446 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 AARS2Q5JTZ9 985 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 SPANXN2Q5MJ10 180 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 RNASEH2BQ5TBB1 312 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PTRH1Q86Y79 214 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PJA1Q8NG27 643 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 UHMK1Q8TAS1 419 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PHOSPHO2Q8TCD6 241 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 TCP10LQ8TDR4 215 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 TRMOQ9BU70 441 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 HERC2P3Q9BVR0 1158 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 KIFC1Q9BW19 673 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms