RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 TRAF2Q12933 501 aa12.6□□□□□ -0.39
LMNA-218ENST00000502357 IHHQ14623 411 aa12.6□□□□□ -0.39
LMNA-218ENST00000502357 CAMK4Q16566 473 aa12.6□□□□□ -0.39
LMNA-218ENST00000502357 TCTN3Q6NUS6 607 aa12.6□□□□□ -0.39
LMNA-218ENST00000502357 SCYL2Q6P3W7 929 aa12.6□□□□□ -0.39
LMNA-218ENST00000502357 TSPAN33Q86UF1 283 aa12.6□□□□□ -0.39
LMNA-218ENST00000502357 CCDC112Q8NEF3 446 aa12.6□□□□□ -0.39
LMNA-218ENST00000502357 MCCC1Q96RQ3 725 aaPredicted RBP12.6□□□□□ -0.39
LMNA-218ENST00000502357 SAMSN1Q9NSI8 373 aaKnown RBP12.6□□□□□ -0.39
LMNA-218ENST00000502357 PLEKHB1Q9UF11 243 aaPredicted RBP12.6□□□□□ -0.39
LMNA-218ENST00000502357 TMEM98Q9Y2Y6 226 aa12.6□□□□□ -0.39
LMNA-218ENST00000502357 TNRC6AQ8NDV7 1962 aaKnown RBP12.6□□□□□ -0.39
LMNA-218ENST00000502357 TRBV23OR9-2A0A075B6M9 112 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 ARHGAP42A6NI28 874 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 A8MU76 341 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 FZD6O60353 706 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 DNAJC6O75061 913 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 KRT7P08729 469 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 PRKCSHP14314 528 aaPredicted RBP12.59□□□□□ -0.39
LMNA-218ENST00000502357 ZNF28P17035 718 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 ERCC2P18074 760 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 ACTR1BP42025 376 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 SCNN1BP51168 640 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 ACTR1AP61163 376 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 AP1S1P61966 158 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 MAP7Q14244 749 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 RFTN1Q14699 578 aaPredicted RBP12.59□□□□□ -0.39
LMNA-218ENST00000502357 CFAP58Q5T655 872 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 CAPRIN2Q6IMN6 1127 aaKnown RBP12.59□□□□□ -0.39
LMNA-218ENST00000502357 TRIM72Q6ZMU5 477 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 FAM129CQ86XR2 697 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 FNIP1Q8TF40 1166 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 SCRN2Q96FV2 425 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 COX14Q96I36 57 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 SMIM14Q96QK8 99 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 AGAP2Q99490 1192 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 ZPBPQ9BS86 351 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 CNPY3Q9BT09 278 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 SELENOOQ9BVL4 669 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 VPS16Q9H269 839 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 HIVEP3Q5T1R4 2406 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 CREBBPQ92793 2442 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 ZNF106Q9H2Y7 1883 aaKnown RBP12.59□□□□□ -0.39
LMNA-218ENST00000502357 MED13Q9UHV7 2174 aa12.59□□□□□ -0.39
LMNA-218ENST00000502357 PSMD11O00231 422 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 ZW10O43264 779 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 SOCS5O75159 536 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 ERCC5P28715 1186 aaPredicted RBP12.58□□□□□ -0.4
LMNA-218ENST00000502357 TPI1P60174 286 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 PTSQ03393 145 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 DPCR1Q3MIW9 517 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 IYDQ6PHW0 289 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 CEACAM20Q6UY09 585 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 ADAMTSL4Q6UY14 1074 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 RFX8Q6ZV50 586 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 TMEM135Q86UB9 458 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 TRIM74Q86UV6 250 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 NLRP8Q86W28 1048 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 NRSN1Q8IZ57 195 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 PIH1D2Q8WWB5 315 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 MCEEQ96PE7 176 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 OR2M4Q96R27 311 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 WDR24Q96S15 920 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 KCTD15Q96SI1 283 aaPredicted RBP12.58□□□□□ -0.4
LMNA-218ENST00000502357 EFHD1Q9BUP0 239 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 CINPQ9BW66 212 aaPredicted RBP12.58□□□□□ -0.4
LMNA-218ENST00000502357 ABCG8Q9H221 673 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 NOD2Q9HC29 1040 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 LRRC4CQ9HCJ2 640 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 KCTD5Q9NXV2 234 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 OGFRQ9NZT2 677 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 CNOT6Q9ULM6 557 aaKnown RBP12.58□□□□□ -0.4
LMNA-218ENST00000502357 SIK3Q9Y2K2 1263 aa12.58□□□□□ -0.4
LMNA-218ENST00000502357 TEP1Q99973 2627 aaKnown RBP12.58□□□□□ -0.4
LMNA-218ENST00000502357 GOLGA6L3A6NEY3 463 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 SEMA7AO75326 666 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 MAP3K6O95382 1288 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 C9P02748 559 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 CALB1P05937 261 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 PDHA1P08559 390 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 TCN2P20062 427 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 GNLYP22749 145 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 POLR2FP61218 127 aaKnown RBP12.57□□□□□ -0.4
LMNA-218ENST00000502357 DPYSQ14117 519 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 ESPL1Q14674 2120 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 LBRQ14739 615 aaKnown RBP12.57□□□□□ -0.4
LMNA-218ENST00000502357 TCP11X2Q5H9J9 407 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 RAET1GQ6H3X3 334 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 C16orf46Q6P387 395 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 SCAMP4Q969E2 229 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 NUDCD1Q96RS6 583 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 MGME1Q9BQP7 344 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 SYT11Q9BT88 431 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 SNRNP25Q9BV90 132 aaKnown RBP12.57□□□□□ -0.4
LMNA-218ENST00000502357 TRIT1Q9H3H1 467 aaKnown RBP12.57□□□□□ -0.4
LMNA-218ENST00000502357 SARS2Q9NP81 518 aaKnown RBP12.57□□□□□ -0.4
LMNA-218ENST00000502357 TBC1D29Q9UFV1 150 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 PHTF1Q9UMS5 762 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 AP4E1Q9UPM8 1137 aa12.57□□□□□ -0.4
LMNA-218ENST00000502357 KCTD3Q9Y597 815 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms