RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 F9P00740 461 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 EGFP01133 1207 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 HOXB5P09067 269 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 TCEA1P23193 301 aaKnown RBP2.45□□□□□ -2.02
SMAD1-203ENST00000502342 CDAP32320 146 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 AMPHP49418 695 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 RARSP54136 660 aaKnown RBP2.45□□□□□ -2.02
SMAD1-203ENST00000502342 DVL1P1P54792 670 aaPredicted RBP2.45□□□□□ -2.02
SMAD1-203ENST00000502342 KRTAP10-6P60371 365 aaPredicted RBP2.45□□□□□ -2.02
SMAD1-203ENST00000502342 CSNK2A1P68400 391 aaPredicted RBP2.45□□□□□ -2.02
SMAD1-203ENST00000502342 FOXM1Q08050 763 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 ILF3Q12906 894 aaKnown RBP eCLIP2.45□□□□□ -2.02
SMAD1-203ENST00000502342 GRIK2Q13002 908 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 FGFBP1Q14512 234 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 USP41Q3LFD5 358 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 ACAD10Q6JQN1 1059 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 TTI2Q6NXR4 508 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 TSSK4Q6SA08 328 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 ATF7IPQ6VMQ6 1270 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 QSOX2Q6ZRP7 698 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 SLC26A9Q7LBE3 791 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 DSG4Q86SJ6 1040 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 ARMC8Q8IUR7 673 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 DCUN1D3Q8IWE4 304 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 SMC5Q8IY18 1101 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 CSNK2A3Q8NEV1 391 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 BBS10Q8TAM1 723 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 LNX1Q8TBB1 728 aaPredicted RBP2.45□□□□□ -2.02
SMAD1-203ENST00000502342 KCNG4Q8TDN1 519 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 ABTB1Q969K4 478 aaPredicted RBP2.45□□□□□ -2.02
SMAD1-203ENST00000502342 ZUFSPQ96AP4 578 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 UHRF2Q96PU4 802 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 EIF2AK1Q9BQI3 630 aaKnown RBP2.45□□□□□ -2.02
SMAD1-203ENST00000502342 TMEM47Q9BQJ4 181 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 RANBP17Q9H2T7 1088 aaKnown RBP2.45□□□□□ -2.02
SMAD1-203ENST00000502342 PREBQ9HCU5 417 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 ABCF3Q9NUQ8 709 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 WDR81Q562E7 1941 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 ASPDHA6ND91 283 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 PRR23AA6NEV1 266 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 CYSRT1A8MQ03 144 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 CAPN9O14815 690 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 SPINT2O43291 252 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 TNFSF14O43557 240 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 PLGP00747 810 aaPredicted RBP2.44□□□□□ -2.02
SMAD1-203ENST00000502342 SP1P08047 785 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 SPARCP09486 303 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 UBL4AP11441 157 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 HLA-DOBP13765 273 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 MYOD1P15172 320 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 ITGA2P17301 1181 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 S1PR1P21453 382 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 CORO1AP31146 461 aaKnown RBP2.44□□□□□ -2.02
SMAD1-203ENST00000502342 USP8P40818 1118 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 PIP4K2AP48426 406 aaPredicted RBP2.44□□□□□ -2.02
SMAD1-203ENST00000502342 KRTAP10-7P60409 375 aaPredicted RBP2.44□□□□□ -2.02
SMAD1-203ENST00000502342 EEF1A1P68104 462 aaKnown RBP2.44□□□□□ -2.02
SMAD1-203ENST00000502342 DMP1Q13316 513 aaPredicted RBP2.44□□□□□ -2.02
SMAD1-203ENST00000502342 FRG1Q14331 258 aaKnown RBP2.44□□□□□ -2.02
SMAD1-203ENST00000502342 PRICKLE4Q2TBC4 344 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 TMEM95Q3KNT9 176 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 KRTAP27-1Q3LI81 207 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 TMEM35AQ53FP2 167 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 C6orf141Q5SZD1 244 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 DCST1Q5T197 706 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 GORABQ5T7V8 394 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 EEF1A1P5Q5VTE0 462 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 PLEKHA7Q6IQ23 1121 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 CDC73Q6P1J9 531 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 GFRALQ6UXV0 394 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 PQLC2Q6ZP29 291 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 SMIM29Q86T20 159 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 GPR180Q86V85 440 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 TMEM219Q86XT9 240 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 TSPYL6Q8N831 410 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 OR2AK2Q8NG84 335 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 OR14L1PQ8NHC6 308 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 GRAMD2BQ96HH9 432 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 TBATAQ96M53 351 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 PCGF1Q9BSM1 259 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 TRMT61BQ9BVS5 477 aaKnown RBP2.44□□□□□ -2.02
SMAD1-203ENST00000502342 MMP28Q9H239 520 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 SLC28A3Q9HAS3 691 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 PLEKHA5Q9HAU0 1116 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 BRF2Q9HAW0 419 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 FBRSL1Q9HCM7 1045 aaKnown RBP2.44□□□□□ -2.02
SMAD1-203ENST00000502342 MMP25Q9NPA2 562 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 TMEM30AQ9NV96 361 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 TAS2R10Q9NYW0 307 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 C9orf78Q9NZ63 289 aaPredicted RBP2.44□□□□□ -2.02
SMAD1-203ENST00000502342 CNOT8Q9UFF9 292 aaKnown RBP2.44□□□□□ -2.02
SMAD1-203ENST00000502342 ERRFI1Q9UJM3 462 aaPredicted RBP2.44□□□□□ -2.02
SMAD1-203ENST00000502342 INTS6Q9UL03 887 aaKnown RBP2.44□□□□□ -2.02
SMAD1-203ENST00000502342 MKLN1Q9UL63 735 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 GTF2A1LQ9UNN4 478 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 FAF1Q9UNN5 650 aaPredicted RBP2.44□□□□□ -2.02
SMAD1-203ENST00000502342 KLHL20Q9Y2M5 609 aa2.44□□□□□ -2.02
SMAD1-203ENST00000502342 A0A1W2PPH5 198 aa2.43□□□□□ -2.02
SMAD1-203ENST00000502342 A0A1W2PQM1 296 aa2.43□□□□□ -2.02
SMAD1-203ENST00000502342 FAM172BPA6NC97 362 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms