RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 SNRPD2P62316 118 aaKnown RBP5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 COX10Q12887 443 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 MRPL28Q13084 256 aaKnown RBP5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 PTK2BQ14289 1009 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 PDPK2PQ6A1A2 396 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 TTC33Q6PID6 262 aaPredicted RBP5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 CHSY3Q70JA7 882 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 ENOSF1Q7L5Y1 443 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 NRSN1Q8IZ57 195 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 UNC5BQ8IZJ1 945 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 SIX6OS1Q8N1H7 587 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 CCDC33Q8N5R6 958 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 BBOF1Q8ND07 529 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 OR6F1Q8NGZ6 308 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 C1orf216Q8TAB5 229 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 TFAP2CQ92754 450 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 TMA16Q96EY4 203 aaKnown RBP5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 ZNF560Q96MR9 790 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 TSGA13Q96PP4 275 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 FYTTD1Q96QD9 318 aaKnown RBP5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 ZNF347Q96SE7 839 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 RBCK1Q9BYM8 510 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 ARHGAP39Q9C0H5 1083 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 SCPEP1Q9HB40 452 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 PNPLA3Q9NST1 481 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 EVA1BQ9NVM1 165 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 ZNF358Q9NW07 568 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 KCNH4Q9UQ05 1017 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 ANGPTL3Q9Y5C1 460 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 CUL9Q8IWT3 2517 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 EYSQ5T1H1 3165 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 DOCK5Q9H7D0 1870 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 CENPBD1B2RD01 187 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 CTDSP2O14595 271 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 MUSKO15146 869 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 OGTO15294 1046 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 AKR7A2O43488 359 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 SNNO75324 88 aaPredicted RBP5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 GCATO75600 419 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 CCNKO75909 580 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 MT-ND1P03886 318 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 MT-ND3P03897 115 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 JUNP05412 331 aaKnown RBP5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 HTR1BP28222 390 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 ICAM3P32942 547 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 EFNA5P52803 228 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 MPP1Q00013 466 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 PRKCQQ04759 706 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 DPY19L1Q2PZI1 675 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 WSCD2Q2TBF2 565 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 PIGGQ5H8A4 983 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 ZNF667Q5HYK9 610 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 KIAA1324Q6UXG2 1013 aaKnown RBP5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 CHSY1Q86X52 802 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 KIAA0319LQ8IZA0 1049 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 CAMKK1Q8N5S9 505 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 ACMSDQ8TDX5 336 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 DNAJB3Q8WWF6 145 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 JADE3Q92613 823 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 FKBP10Q96AY3 582 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 RCN3Q96D15 328 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 APOPT1Q96IL0 206 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 TXNDC15Q96J42 360 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 SORT1Q99523 831 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 NPAS2Q99743 824 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 TM9SF2Q99805 663 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 UQCC2Q9BRT2 126 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 HAPLN2Q9GZV7 340 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 BRD7Q9NPI1 651 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 C8orf4Q9NR00 106 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 TOR4AQ9NXH8 423 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 MOCS1Q9NZB8 636 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 MTRRQ9UBK8 725 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 SLC8A2Q9UPR5 921 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 NOD1Q9Y239 953 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 B3GNT3Q9Y2A9 372 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 A0A0U1RQS6 177 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 FAM221AA4D161 298 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 OR5K4A6NMS3 321 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 B8ZZF3 427 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 CLDN25C9JDP6 229 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 M0R3H8 397 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 DNALI1O14645 258 aaPredicted RBP5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 NRP2O60462 931 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 SPAG6O75602 509 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 GRAP2O75791 330 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 DNTTP04053 509 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 SMPD1P17405 629 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 TYRP1P17643 537 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 MMP8P22894 467 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 AKAP5P24588 427 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 ARL2P36404 184 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 SLC9A3P48764 834 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 DYNLT1P63172 113 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 C17orf67Q0P5P2 114 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 GALNT1Q10472 559 aaPredicted RBP5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 CDK10Q15131 360 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 TOR2AQ5JU69 321 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 KCNT1Q5JUK3 1230 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 RNASEH2BQ5TBB1 312 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms