RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 NCAPHQ15003 741 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 SYCP1Q15431 976 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 SNAP47Q5SQN1 464 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 TMCO4Q5TGY1 634 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 RFLNAQ6ZTI6 216 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 TIPARPQ7Z3E1 657 aaKnown RBP14.64□□□□□ -0.07
TRAF4-212ENST00000498540 TRIM74Q86UV6 250 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 NLGN4XQ8N0W4 816 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 PGBD5Q8N414 524 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 ARFGAP1Q8N6T3 406 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 NLGN4YQ8NFZ3 816 aaPredicted RBP14.64□□□□□ -0.07
TRAF4-212ENST00000498540 SLC37A2Q8TED4 501 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 SCARF2Q96GP6 870 aaPredicted RBP14.64□□□□□ -0.07
TRAF4-212ENST00000498540 ABHD17AQ96GS6 310 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 OR2M4Q96R27 311 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 KCTD5Q9NXV2 234 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 PDP2Q9P2J9 529 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 PCSK1NQ9UHG2 260 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 TMEM98Q9Y2Y6 226 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 A8MU76 341 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 EIF3CLB5ME19 914 aaKnown RBP14.63□□□□□ -0.07
TRAF4-212ENST00000498540 ATMINO43313 823 aaPredicted RBP14.63□□□□□ -0.07
TRAF4-212ENST00000498540 EML2O95834 649 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 PSMA2P25787 234 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 TEAD1P28347 426 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 FASLGP48023 281 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 PPM1FP49593 454 aaPredicted RBP14.63□□□□□ -0.07
TRAF4-212ENST00000498540 RENBPP51606 427 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 PEX6Q13608 980 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 ZNF235Q14590 738 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 DEFB109BQ30KR1 87 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 PPP6R3Q5H9R7 873 aaPredicted RBP14.63□□□□□ -0.07
TRAF4-212ENST00000498540 ERMARDQ5T6L9 678 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 ATP1A1-AS1Q5TC04 95 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 CDKAL1Q5VV42 579 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 CYP4V2Q6ZWL3 525 aaPredicted RBP14.63□□□□□ -0.07
TRAF4-212ENST00000498540 MARK2Q7KZI7 788 aaKnown RBP14.63□□□□□ -0.07
TRAF4-212ENST00000498540 MCOLN2Q8IZK6 566 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 KIAA1143Q96AT1 154 aaPredicted RBP14.63□□□□□ -0.07
TRAF4-212ENST00000498540 AHCYL2Q96HN2 611 aaKnown RBP14.63□□□□□ -0.07
TRAF4-212ENST00000498540 TEFMQ96QE5 360 aaKnown RBP14.63□□□□□ -0.07
TRAF4-212ENST00000498540 EIF3CQ99613 913 aaKnown RBP14.63□□□□□ -0.07
TRAF4-212ENST00000498540 AGPAT1Q99943 283 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 NOD2Q9HC29 1040 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 APMAPQ9HDC9 416 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 CD84Q9UIB8 345 aa14.63□□□□□ -0.07
TRAF4-212ENST00000498540 SPTAN1Q13813 2472 aaKnown RBP14.63□□□□□ -0.07
TRAF4-212ENST00000498540 PSMD11O00231 422 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 MAP3K6O95382 1288 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 PEX11BO96011 259 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 CYP2A6P11509 494 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-212ENST00000498540 DESP17661 470 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 MAP4P27816 1152 aaKnown RBP14.62□□□□□ -0.07
TRAF4-212ENST00000498540 GPR1P46091 355 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 MC2RQ01718 297 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 DPTQ07507 201 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 DPYSQ14117 519 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 LACTB2Q53H82 288 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-212ENST00000498540 PYCR3Q53H96 274 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 FKBP15Q5T1M5 1219 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 ARHGAP22Q7Z5H3 698 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 TECPR1Q7Z6L1 1165 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 SFRP1Q8N474 314 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 FAM26EQ8N5C1 309 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 OR10G6Q8NH81 332 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 APOBEC4Q8WW27 367 aaKnown RBP14.62□□□□□ -0.07
TRAF4-212ENST00000498540 STARD8Q92502 1023 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 ZNF599Q96NL3 588 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 PSMG3-AS1Q96PY0 264 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 MCCC1Q96RQ3 725 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-212ENST00000498540 NUDCD1Q96RS6 583 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 SLC38A3Q99624 504 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 TAS2R14Q9NYV8 317 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 CWC15Q9P013 229 aaKnown RBP14.62□□□□□ -0.07
TRAF4-212ENST00000498540 PHTF1Q9UMS5 762 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 PCYT1BQ9Y5K3 369 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-212ENST00000498540 NBPF19A0A087WUL8 3843 aa14.62□□□□□ -0.07
TRAF4-212ENST00000498540 A0A1W2PQ67 120 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 BLACEA4D250 179 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 PRR19A6NJB7 356 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 STK17BO94768 372 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 CTPS1P17812 591 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 NR1D1P20393 614 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 MAXP61244 160 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 ABHD18Q0P651 414 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 MAMLD1Q13495 774 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.61□□□□□ -0.07
TRAF4-212ENST00000498540 ACAD10Q6JQN1 1059 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 WDR74Q6RFH5 385 aaPredicted RBP14.61□□□□□ -0.07
TRAF4-212ENST00000498540 CEACAM20Q6UY09 585 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 ADAMTSL4Q6UY14 1074 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 NEK11Q8NG66 645 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 SCAMP4Q969E2 229 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 MIB2Q96AX9 1013 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 SCRN2Q96FV2 425 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 SMIM14Q96QK8 99 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 MGME1Q9BQP7 344 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 TRIM7Q9C029 511 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 ABCG8Q9H221 673 aa14.61□□□□□ -0.07
TRAF4-212ENST00000498540 TP53TG5Q9Y2B4 290 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms