RNA–Protein interactions for RNA: ENST00000498525.5

CDK5RAP1-216, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 5

Gene CDK5RAP1, Length 777 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-216ENST00000498525 ZNF761Q86XN6 746 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ZNF843Q8N446 348 aa12.12□□□□□ -0.47
CDK5RAP1-216ENST00000498525 RCBTB1Q8NDN9 531 aa12.12□□□□□ -0.47
CDK5RAP1-216ENST00000498525 WDR48Q8TAF3 677 aa12.12□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ARRDC2Q8TBH0 407 aa12.12□□□□□ -0.47
CDK5RAP1-216ENST00000498525 RAPGEF5Q92565 580 aa12.12□□□□□ -0.47
CDK5RAP1-216ENST00000498525 MCCC1Q96RQ3 725 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP1-216ENST00000498525 NUDT22Q9BRQ3 303 aa12.12□□□□□ -0.47
CDK5RAP1-216ENST00000498525 CEP41Q9BYV8 373 aa12.12□□□□□ -0.47
CDK5RAP1-216ENST00000498525 DPH1Q9BZG8 443 aa12.12□□□□□ -0.47
CDK5RAP1-216ENST00000498525 APPL1Q9UKG1 709 aa12.12□□□□□ -0.47
CDK5RAP1-216ENST00000498525 LOXL2Q9Y4K0 774 aa12.12□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ZNF462Q96JM2 2506 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 A0A0J9YYE9 177 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 MATN3O15232 486 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 PPM1DO15297 605 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 EML2O95834 649 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 TRBC1P01850 177 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ATP1A1P05023 1023 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ITGA2BP08514 1039 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 EPHB1P54762 984 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ZFP36L1Q07352 338 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 C19orf57Q0VDD7 668 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 MESDQ14696 234 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 C16orf72Q14CZ0 275 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ZFYVE27Q5T4F4 411 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 NPNTQ6UXI9 565 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 USP45Q70EL2 814 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 KDELC2Q7Z4H8 507 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ZFAND4Q86XD8 727 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 NAGSQ8N159 534 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 CCNYQ8ND76 341 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 LPCAT1Q8NF37 534 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 SPOCK2Q92563 424 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 MAML1Q92585 1016 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 USP7Q93009 1102 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 PMEPA1Q969W9 287 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 GRAMD1AQ96CP6 724 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 AP2M1Q96CW1 435 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 CHP1Q99653 195 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 RIOK2Q9BVS4 552 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 POLR1EQ9GZS1 481 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 BRD8Q9H0E9 1235 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ARFGAP3Q9NP61 516 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 FOXJ2Q9P0K8 574 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 SSUH2Q9Y2M2 353 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 PPIL1Q9Y3C6 166 aa12.11□□□□□ -0.47
CDK5RAP1-216ENST00000498525 PRAMEF33A0A0G2JMD5 474 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 A0A1W2PQ67 120 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 RHPN2P1A8MT19 583 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 PYCARD-AS1I3L0S3 204 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 KCNK1O00180 336 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 PDE2AO00408 941 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 PRAMEF10O60809 474 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 JCHAINP01591 159 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 MMP2P08253 660 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 JMJD7P0C870 316 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 CCL4P13236 92 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 TNNT1P13805 278 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 KDELR1P24390 212 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 CCKBRP32239 447 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ACTR1BP42025 376 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ACTR1AP61163 376 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 CFHR1Q03591 330 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ILF3Q12906 894 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ZBTB17Q13105 803 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 IFI16Q16666 785 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ASTE1Q2TB18 679 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 MAP9Q49MG5 647 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ZNF648Q5T619 568 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 CCDC81Q6ZN84 652 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 VASH2Q86V25 355 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 C17orf82Q86X59 251 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 SLITRK4Q8IW52 837 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 OR6C4Q8NGE1 309 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 JPH3Q8WXH2 748 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 TTC9Q92623 222 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 TMEM74Q96NL1 305 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 WDR24Q96S15 920 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 TDRD1Q9BXT4 1180 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 GSDMCQ9BYG8 508 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 STRADBQ9C0K7 418 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 SPTLC3Q9NUV7 552 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 TMEM9Q9P0T7 183 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 RCOR3Q9P2K3 495 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 SLC17A4Q9Y2C5 497 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 HYOU1Q9Y4L1 999 aa12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 OAS3Q9Y6K5 1087 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ZNF106Q9H2Y7 1883 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP1-216ENST00000498525 C9orf172C9J069 976 aa12.09□□□□□ -0.47
CDK5RAP1-216ENST00000498525 K7ENP7 123 aa12.09□□□□□ -0.47
CDK5RAP1-216ENST00000498525 PSMD11O00231 422 aa12.09□□□□□ -0.47
CDK5RAP1-216ENST00000498525 NUDT21O43809 227 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP1-216ENST00000498525 ASMTLO95671 621 aa12.09□□□□□ -0.47
CDK5RAP1-216ENST00000498525 H2AFZP0C0S5 128 aa12.09□□□□□ -0.47
CDK5RAP1-216ENST00000498525 PIRTP0C851 137 aa12.09□□□□□ -0.47
CDK5RAP1-216ENST00000498525 PNLIPP16233 465 aa12.09□□□□□ -0.47
CDK5RAP1-216ENST00000498525 CCNCP24863 283 aa12.09□□□□□ -0.47
CDK5RAP1-216ENST00000498525 CD1CP29017 333 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms