RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 ZNF268Q14587 947 aaPredicted RBP4.14□□□□□ -1.75
USP54-217ENST00000498213 SAFBQ15424 915 aaKnown RBP eCLIP4.14□□□□□ -1.75
USP54-217ENST00000498213 NAB2Q15742 525 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 NPY5RQ15761 445 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 CALCRLQ16602 461 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 ZSCAN23Q3MJ62 389 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 ARHGAP15Q53QZ3 475 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 ALKAL1Q6UXT8 129 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 USP37Q86T82 979 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 FAM90A1Q86YD7 464 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 GRAMD1CQ8IYS0 662 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 FAM46DQ8NEK8 389 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 SSC4DQ8WTU2 575 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 TMEM143Q96AN5 459 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 SARAFQ96BY9 339 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 FAM136AQ96C01 138 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 ERLEC1Q96DZ1 483 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 MVB12AQ96EY5 273 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 PPP1R10Q96QC0 940 aaKnown RBP4.14□□□□□ -1.75
USP54-217ENST00000498213 MTMR9Q96QG7 549 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 TIMP4Q99727 224 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 EIF2AK1Q9BQI3 630 aaKnown RBP4.14□□□□□ -1.75
USP54-217ENST00000498213 PAAF1Q9BRP4 392 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 LLPHQ9BRT6 129 aaKnown RBP4.14□□□□□ -1.75
USP54-217ENST00000498213 BRINP2Q9C0B6 783 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 MRPL46Q9H2W6 279 aaKnown RBP4.14□□□□□ -1.75
USP54-217ENST00000498213 FOXP1Q9H334 677 aaPredicted RBP4.14□□□□□ -1.75
USP54-217ENST00000498213 NXF3Q9H4D5 531 aaKnown RBP4.14□□□□□ -1.75
USP54-217ENST00000498213 MINDY3Q9H8M7 445 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 SARS2Q9NP81 518 aaKnown RBP4.14□□□□□ -1.75
USP54-217ENST00000498213 ZDHHC4Q9NPG8 344 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 HPS4Q9NQG7 708 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 XPNPEP1Q9NQW7 623 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 PNPOQ9NVS9 261 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 ETAA1Q9NY74 926 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 EHD3Q9NZN3 535 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 DERAQ9Y315 318 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 KIF3AQ9Y496 699 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 SNX14Q9Y5W7 946 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 EVPLQ92817 2033 aa4.14□□□□□ -1.75
USP54-217ENST00000498213 ATRQ13535 2644 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 SMIM28A0A1B0GU29 152 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 TCRBV21S2A2A0A5A6 115 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 LRRIQ4A6NIV6 560 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 K7ERI5 159 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 M0QZQ0 153 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 PTGESO14684 152 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 SLC37A4O43826 429 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 PFKFB2O60825 505 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 TOM1L1O75674 476 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 PRAMEF12O95522 483 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 CER1O95813 267 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 AHSGP02765 367 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 PRKCBP05771 671 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 ADRB2P07550 413 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 FAM163BP0C2L3 166 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 PF4V1P10720 104 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 GNSP15586 552 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 ZFXP17010 805 aaPredicted RBP4.13□□□□□ -1.75
USP54-217ENST00000498213 NDUFB7P17568 137 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 LPOP22079 712 aaPredicted RBP4.13□□□□□ -1.75
USP54-217ENST00000498213 AKAP5P24588 427 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 MARCKSP29966 332 aaPredicted RBP4.13□□□□□ -1.75
USP54-217ENST00000498213 PRPHP41219 470 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 PNPLA4P41247 253 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 UQCRFS1P47985 274 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 PPP3CCP48454 512 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 IL9RQ01113 521 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 BNC1Q01954 994 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 ROR1Q01973 937 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 CYP4A11Q02928 519 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 YWHAHQ04917 246 aaPredicted RBP4.13□□□□□ -1.75
USP54-217ENST00000498213 EIF2B5Q13144 721 aaKnown RBP4.13□□□□□ -1.75
USP54-217ENST00000498213 GPR17Q13304 367 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 VEPH1Q14D04 833 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 PDGFRLQ15198 375 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 TBCCQ15814 346 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 ADCK5Q3MIX3 580 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 FHL5Q5TD97 284 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 ATF7IP2Q5U623 682 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 SUMO4Q6EEV6 95 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 KDM7AQ6ZMT4 941 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 TMPRSS9Q7Z410 1059 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 TPH2Q8IWU9 490 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 ZCCHC9Q8N567 271 aaKnown RBP4.13□□□□□ -1.75
USP54-217ENST00000498213 ALLCQ8N6M5 410 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 BPIFB1Q8TDL5 484 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 CD101Q93033 1021 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 PSMG2Q969U7 264 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 SLC35A4Q96G79 324 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 CDK5RAP3Q96JB5 506 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 VCPIP1Q96JH7 1222 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 ZNF578Q96N58 590 aaPredicted RBP4.13□□□□□ -1.75
USP54-217ENST00000498213 GCNAQ96QF7 691 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 EIF2AQ9BY44 585 aaKnown RBP4.13□□□□□ -1.75
USP54-217ENST00000498213 LRRC2Q9BYS8 371 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 GTPBP4Q9BZE4 634 aaKnown RBP4.13□□□□□ -1.75
USP54-217ENST00000498213 DPH1Q9BZG8 443 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 TTYH3Q9C0H2 523 aa4.13□□□□□ -1.75
USP54-217ENST00000498213 CCSER1Q9C0I3 900 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms