RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 CCDC78A2IDD5 438 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 MROH6A6NGR9 719 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 A8MT66 165 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 BBIP1A8MTZ0 92 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 PSMD12O00232 456 aaPredicted RBP12.43□□□□□ -0.42
AFF3-215ENST00000498090 PER2O15055 1255 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 GPC4O75487 556 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 RTN3O95197 1032 aaPredicted RBP12.43□□□□□ -0.42
AFF3-215ENST00000498090 TNFAIP8O95379 198 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 STAMBPO95630 424 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 PEX11BO96011 259 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 C8AP07357 584 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 C8BP07358 591 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 F7P08709 466 aaPredicted RBP12.43□□□□□ -0.42
AFF3-215ENST00000498090 EPCAMP16422 314 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 XRCC1P18887 633 aaPredicted RBP12.43□□□□□ -0.42
AFF3-215ENST00000498090 YWHAQP27348 245 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 TAF10Q12962 218 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 TRIM25Q14258 630 aaKnown RBP12.43□□□□□ -0.42
AFF3-215ENST00000498090 CSHL1Q14406 222 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 SPATS1Q496A3 300 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 HECTD2Q5U5R9 776 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 PDE12Q6L8Q7 609 aaKnown RBP12.43□□□□□ -0.42
AFF3-215ENST00000498090 CUZD1Q86UP6 607 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 CILP2Q8IUL8 1156 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 AHI1Q8N157 1196 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 ATP6V0D2Q8N8Y2 350 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 PHC3Q8NDX5 983 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 FBXO32Q969P5 355 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 TADA1Q96BN2 335 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 SLC39A13Q96H72 371 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 ZNF419Q96HQ0 510 aaPredicted RBP12.43□□□□□ -0.42
AFF3-215ENST00000498090 CEP295NLQ96MC4 621 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 DDX50Q9BQ39 737 aaKnown RBP12.43□□□□□ -0.42
AFF3-215ENST00000498090 EFHD1Q9BUP0 239 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 LMAN2LQ9H0V9 348 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 RETREG1Q9H6L5 497 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 OLA1Q9NTK5 396 aaKnown RBP12.43□□□□□ -0.42
AFF3-215ENST00000498090 SFMBT1Q9UHJ3 866 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 PADI4Q9UM07 663 aa12.43□□□□□ -0.42
AFF3-215ENST00000498090 IGLV3-10A0A075B6K4 115 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 C15orf38-AP3S2A0A0A6YYH1 394 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 CAPN8A6NHC0 703 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 TXNDC9O14530 226 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 CFLARO15519 480 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 WISP3O95389 354 aaPredicted RBP12.42□□□□□ -0.42
AFF3-215ENST00000498090 EPOP01588 193 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 SNRPB2P08579 225 aaKnown RBP12.42□□□□□ -0.42
AFF3-215ENST00000498090 ZDHHC11BP0C7U3 371 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 CCDC166P0CW27 439 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 CCR10P46092 362 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 RPL5P46777 297 aaKnown RBP12.42□□□□□ -0.42
AFF3-215ENST00000498090 POLE2P56282 527 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 PSME3P61289 254 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 MRPS22P82650 360 aaKnown RBP12.42□□□□□ -0.42
AFF3-215ENST00000498090 ACVR1Q04771 509 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 PLD1Q13393 1074 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 FASTKQ14296 549 aaKnown RBP12.42□□□□□ -0.42
AFF3-215ENST00000498090 ZNF460Q14592 562 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 PARP15Q460N3 678 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 SAMD4BQ5PRF9 694 aaKnown RBP12.42□□□□□ -0.42
AFF3-215ENST00000498090 THEMIS2Q5TEJ8 643 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 TMEM198Q66K66 360 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 CNSTQ6PJW8 725 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 ARPINQ7Z6K5 226 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 ALDH16A1Q8IZ83 802 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 GPR150Q8NGU9 434 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 DDI1Q8WTU0 396 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 ROPN1LQ96C74 230 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 SP110Q9HB58 689 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 ZNF334Q9HCZ1 680 aaPredicted RBP12.42□□□□□ -0.42
AFF3-215ENST00000498090 SPAG4Q9NPE6 437 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 COMMD8Q9NX08 183 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 MYO16Q9Y6X6 1858 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 GREB1Q4ZG55 1949 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 MSI1O43347 362 aaKnown RBP12.42□□□□□ -0.42
AFF3-215ENST00000498090 DNAJA2O60884 412 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 HLA-DPA1P20036 260 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 GSTT1P30711 240 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 TBX4P57082 545 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 YBEYP58557 167 aaPredicted RBP12.42□□□□□ -0.42
AFF3-215ENST00000498090 STX1BP61266 288 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 PRAMEP78395 509 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 CREB5Q02930 508 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 IL10RBQ08334 325 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 LRP8Q14114 963 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 CNPY1Q3B7I2 92 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 PRMT9Q6P2P2 845 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 RAB44Q7Z6P3 723 aaPredicted RBP12.42□□□□□ -0.42
AFF3-215ENST00000498090 RBM23Q86U06 439 aaKnown RBP12.42□□□□□ -0.42
AFF3-215ENST00000498090 ZNF683Q8IZ20 524 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 PCYOX1LQ8NBM8 494 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 OR13J1Q8NGT2 312 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 BTN2A3PQ96KV6 586 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 PPP1R36Q96LQ0 422 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 CYP2S1Q96SQ9 504 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 MRPS26Q9BYN8 205 aaKnown RBP12.42□□□□□ -0.42
AFF3-215ENST00000498090 ZNF696Q9H7X3 374 aa12.42□□□□□ -0.42
AFF3-215ENST00000498090 G3BP2Q9UN86 482 aaKnown RBP12.42□□□□□ -0.42
AFF3-215ENST00000498090 TRAF6Q9Y4K3 522 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms