RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 LYG1Q8N1E2 194 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 LSM14AQ8ND56 463 aaKnown RBP3.63□□□□□ -1.83
SMC4-227ENST00000497984 TRIM63Q969Q1 353 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 SCRN2Q96FV2 425 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 LRR1Q96L50 414 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 COG8Q96MW5 612 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 MTERF1Q99551 399 aaKnown RBP3.63□□□□□ -1.83
SMC4-227ENST00000497984 MAGEE1Q9HCI5 957 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 ITM2CQ9NQX7 267 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 BABAM1Q9NWV8 329 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 PEMTQ9UBM1 199 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 PCDHGB3Q9Y5G1 929 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 KIAA1210Q9ULL0 1709 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 NR5A2O00482 541 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 KLK10O43240 276 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 PRKNO60260 465 aaPredicted RBP3.62□□□□□ -1.83
SMC4-227ENST00000497984 IGHV4-39P01824 125 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 HEXAP06865 529 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 DDX5P17844 614 aaKnown RBP3.62□□□□□ -1.83
SMC4-227ENST00000497984 SHMT1P34896 483 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 HALP42357 657 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 GPD2P43304 727 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 METAP2P50579 478 aaKnown RBP eCLIP3.62□□□□□ -1.83
SMC4-227ENST00000497984 EEF1A1P68104 462 aaKnown RBP3.62□□□□□ -1.83
SMC4-227ENST00000497984 ZNF234Q14588 700 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 CCDC96Q2M329 555 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 WDR38Q5JTN6 314 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 EEF1A1P5Q5VTE0 462 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 SFMBT2Q5VUG0 894 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 FBXO46Q6PJ61 603 aaPredicted RBP3.62□□□□□ -1.83
SMC4-227ENST00000497984 LDHAL6AQ6ZMR3 332 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 C15orf39Q6ZRI6 1047 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 SUGP1Q8IWZ8 645 aaKnown RBP3.62□□□□□ -1.83
SMC4-227ENST00000497984 ZNF354BQ96LW1 612 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 ZSCAN31Q96LW9 406 aaPredicted RBP3.62□□□□□ -1.83
SMC4-227ENST00000497984 EYA3Q99504 573 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 SH3GL2Q99962 352 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 TAOK3Q9H2K8 898 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 ALKBH4Q9NXW9 302 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 FBXO9Q9UK97 447 aaPredicted RBP3.62□□□□□ -1.83
SMC4-227ENST00000497984 LOXL2Q9Y4K0 774 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 RNF215Q9Y6U7 377 aa3.62□□□□□ -1.83
SMC4-227ENST00000497984 GOLGA6L10A0A0M3HER8 536 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 PIP5K1CO60331 668 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 ERVK-10P10266 1014 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 BDKRB2P30411 391 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 CHRNB4P30926 498 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 EFNA5P52803 228 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 TERF1P54274 439 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 IRX1P78414 480 aaPredicted RBP3.61□□□□□ -1.83
SMC4-227ENST00000497984 RPL24P83731 157 aaKnown RBP3.61□□□□□ -1.83
SMC4-227ENST00000497984 TAF11Q15544 211 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 TCTN1Q2MV58 587 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 SLC45A4Q5BKX6 768 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 WDR45BQ5MNZ6 344 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 NAA35Q5VZE5 725 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 FAM53AQ6NSI3 398 aaPredicted RBP3.61□□□□□ -1.83
SMC4-227ENST00000497984 SH2D6Q7Z4S9 175 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 DHX40Q8IX18 779 aaKnown RBP3.61□□□□□ -1.83
SMC4-227ENST00000497984 SPATA6LQ8N4H0 392 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 ZBTB2Q8N680 514 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 STPG4Q8N801 248 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 HERVK_113Q902F9 699 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 TM9SF4Q92544 642 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 PIGTQ969N2 578 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 REEP2Q9BRK0 252 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 PHF7Q9BWX1 381 aaPredicted RBP3.61□□□□□ -1.83
SMC4-227ENST00000497984 TFB2MQ9H5Q4 396 aaKnown RBP3.61□□□□□ -1.83
SMC4-227ENST00000497984 PPP1R3EQ9H7J1 279 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 SLC52A3Q9NQ40 469 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 GPR52Q9Y2T5 361 aa3.61□□□□□ -1.83
SMC4-227ENST00000497984 LSM4Q9Y4Z0 139 aaKnown RBP3.61□□□□□ -1.83
SMC4-227ENST00000497984 IGLV5-45A0A087WSX0 123 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 HHLA1C9JL84 531 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 GUCY1B2O75343 617 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 MT-CYBP00156 380 aaPredicted RBP3.6□□□□□ -1.83
SMC4-227ENST00000497984 IGLV1-44P01699 117 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 PRSS56P0CW18 603 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 GNB3P16520 340 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 DSCR10P59022 87 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 SLC12A1Q13621 1099 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 FAM171BQ6P995 826 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 SUSD1Q6UWL2 747 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.6□□□□□ -1.83
SMC4-227ENST00000497984 TADA2BQ86TJ2 420 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 SPAG16Q8N0X2 631 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 PLD5Q8N7P1 536 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 ANKRD42Q8N9B4 389 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 NOC3LQ8WTT2 800 aaKnown RBP3.6□□□□□ -1.83
SMC4-227ENST00000497984 BBS4Q96RK4 519 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 IL1RAPL1Q9NZN1 696 aa3.6□□□□□ -1.83
SMC4-227ENST00000497984 ZNHIT1O43257 154 aa3.59□□□□□ -1.83
SMC4-227ENST00000497984 KRT9P35527 623 aa3.59□□□□□ -1.83
SMC4-227ENST00000497984 CCT5P48643 541 aa3.59□□□□□ -1.83
SMC4-227ENST00000497984 CLK1P49759 484 aaKnown RBP3.59□□□□□ -1.83
SMC4-227ENST00000497984 UBE3AQ05086 875 aa3.59□□□□□ -1.83
SMC4-227ENST00000497984 VEPH1Q14D04 833 aa3.59□□□□□ -1.83
SMC4-227ENST00000497984 HIST2H2BDQ6DRA6 164 aa3.59□□□□□ -1.83
SMC4-227ENST00000497984 METTL2BQ6P1Q9 378 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms