RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	CLCN3	P51790	818 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	DIO3	P55073	304 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RAB10	P61026	200 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	E2F2	Q14209	437 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	GRB7	Q14451	532 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RFTN1	Q14699	578 aa	Predicted RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CLPP	Q16740	277 aa	Predicted RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NCBP2-AS2	Q69YL0	99 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	GLYAT	Q6IB77	296 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	GALNT12	Q8IXK2	581 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ADGRG5	Q8IZF4	528 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CGREF1	Q99674	301 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	AKTIP	Q9H8T0	292 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CD320	Q9NPF0	282 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SEMA4B	Q9NPR2	832 aa	Predicted RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CMTM6	Q9NX76	183 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RABL2A	Q9UBK7	228 aa	Predicted RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RIPK3	Q9Y572	518 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	DLGAP1	O14490	977 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PEX10	O60683	326 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SOAT2	O75908	522 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MT-CYB	P00156	380 aa	Predicted RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PGK1	P00558	417 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PRKACB	P22694	351 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CAP2	P40123	477 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SLC6A3	Q01959	620 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RBM20	Q5T481	1227 aa	Known RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ATF7IP2	Q5U623	682 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CYP2U1	Q7Z449	544 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MILR1	Q7Z6M3	343 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ASCC1	Q8N9N2	400 aa	Known RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RNF139	Q8WU17	664 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	HDAC2	Q92769	488 aa	Known RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ZDHHC15	Q96MV8	337 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PLSCR3	Q9NRY6	295 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SLAMF8	Q9P0V8	285 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	VPS28	Q9UK41	221 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ANGPTL3	Q9Y5C1	460 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	LACTBL1	A8MY62	500 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597		H0YJX3	145 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TRIM24	O15164	1050 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ICMT	O60725	284 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CPNE3	O75131	537 aa	Known RBP	10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CST1	P01037	141 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	DNTT	P04053	509 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SLC35E2B	P0CK96	405 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SPN	P16150	400 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CD40LG	P29965	261 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ARSF	P54793	590 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TPI1	P60174	286 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ATP6AP1	Q15904	470 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PFKFB4	Q16877	469 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CEP78	Q5JTW2	689 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	LRRC49	Q8IUZ0	686 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PSTK	Q8IV42	348 aa	Known RBP	10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	DEFB106A	Q8N104	65 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	C1orf127	Q8N9H9	656 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ZNF540	Q8NDQ6	660 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PABPC5	Q96DU9	382 aa	Known RBP	10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	C19orf60	Q96EN9	201 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	C3orf30	Q96M34	536 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ZNF560	Q96MR9	790 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	FSD1L	Q9BXM9	530 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ADAMTS10	Q9H324	1103 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	AGPAT4	Q9NRZ5	378 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ERVK-18	Q9QC07	812 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SLC2A6	Q9UGQ3	507 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	FBXO9	Q9UK97	447 aa	Predicted RBP	10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ADAM28	Q9UKQ2	775 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	GOLGA8CP	A6NN73	597 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ZNF99	A8MXY4	864 aa	Predicted RBP	10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PIP5K1B	O14986	540 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	FAM20B	O75063	409 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ITIH1	P19827	911 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RFC2	P35250	354 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ST13	P50502	369 aa	Known RBP	10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CCT8	P50990	548 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	KPNA2	P52292	529 aa	Known RBP	10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CD47	Q08722	323 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	KCNAB2	Q13303	367 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	LRIT3	Q3SXY7	679 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NOMO2	Q5JPE7	1267 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	C11orf74	Q86VG3	221 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TTC30B	Q8N4P2	665 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CPSF7	Q8N684	471 aa	Known RBP	10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MFSD2A	Q8NA29	543 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	FLAD1	Q8NFF5	587 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	OR7G1	Q8NGA0	311 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NUDT8	Q8WV74	236 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	FAM162A	Q96A26	154 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MYOC	Q99972	504 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	FICD	Q9BVA6	458 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PORCN	Q9H237	461 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RHOJ	Q9H4E5	214 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NRBP2	Q9NSY0	501 aa		10.6	□□□□□ -0.71
TRAPPC12-223	ENST00000497597		G3V2T6	193 aa		10.59	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NUAK1	O60285	661 aa		10.59	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CRYZL1	O95825	349 aa		10.59	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ANGPTL1	O95841	491 aa		10.59	□□□□□ -0.71

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