RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ITIH1P19827 911 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 PRKACGP22612 351 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 PRKACBP22694 351 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 PSMD8P48556 350 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 DPY19L1Q2PZI1 675 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 XKR3Q5GH77 459 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 C6orf141Q5SZD1 244 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 STEAP3Q658P3 488 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 ARHGAP17Q68EM7 881 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 TRAF7Q6Q0C0 670 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 CCBE1Q6UXH8 406 aaPredicted RBP13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 ACOT1Q86TX2 421 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 OSCP1Q8WVF1 389 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 PROX1Q92786 737 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 CDHR5Q9HBB8 845 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 ZNF70Q9UC06 446 aaPredicted RBP13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 STYXL1Q9Y6J8 313 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 TNRC6CQ9HCJ0 1690 aaKnown RBP13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 ALDOCP09972 364 aaKnown RBP13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 CYP4B1P13584 511 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 IL12AP29459 219 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 FMO3P31513 532 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 HK2P52789 917 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 TAS2R39P59534 338 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 MCCD1P59942 119 aaPredicted RBP13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 HIST2H2ACQ16777 129 aaPredicted RBP13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 SPESP1Q6UW49 350 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 NIPA1Q7RTP0 329 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 P2RY8Q86VZ1 359 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 ELMOD2Q8IZ81 293 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 ZUFSPQ96AP4 578 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 DUS3LQ96G46 650 aaKnown RBP13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 C1QTNF1Q9BXJ1 281 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 DSN1Q9H410 356 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 PDZD7Q9H5P4 517 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 PXMP2Q9NR77 195 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 INTS10Q9NVR2 710 aaKnown RBP13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 FEM1BQ9UK73 627 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 N6AMT1Q9Y5N5 214 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 PMF1-BGLAPU3KQ54 211 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 OGTO15294 1046 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 HTR1AP08908 422 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 SLC6A2P23975 617 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 CD47Q08722 323 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 BNIP2Q12982 314 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 FKBP9P1Q75LS8 142 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 TBC1D21Q8IYX1 336 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 ZNF280CQ8ND82 737 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 FBXO30Q8TB52 745 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 LRRC58Q96CX6 371 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 TXNDC15Q96J42 360 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 MRPL4Q9BYD3 311 aaKnown RBP13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 YTHDF1Q9BYJ9 559 aaKnown RBP13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 PRRG3Q9BZD7 231 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 PORCNQ9H237 461 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 EML4Q9HC35 981 aaKnown RBP13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 THG1LQ9NWX6 298 aaKnown RBP13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 INVSQ9Y283 1065 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 M0QX08 132 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 SOAT2O75908 522 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 SLC4A1P02730 911 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 GPIP06744 558 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 ATP5F1P24539 256 aaPredicted RBP13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 PIGAP37287 484 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 NR2C2P49116 596 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 AP3M2P53677 418 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 RAB10P61026 200 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 DAG1Q14118 895 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 AMHR2Q16671 573 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 ZFP69Q49AA0 526 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 TTC23LQ6PF05 361 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 SCIMPQ6UWF3 145 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 LYSMD2Q8IV50 215 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 CADM2Q8N3J6 435 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 OR13J1Q8NGT2 312 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 ZHX1-C8orf76Q96EF9 292 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 ZNF560Q96MR9 790 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 TBCBQ99426 244 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 RHOJQ9H4E5 214 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 AKTIPQ9H8T0 292 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 MICAL3Q7RTP6 2002 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 PTPRFP10586 1907 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 B4GALT5O43286 388 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 PRKCBP05771 671 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 HOXC6P09630 235 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 JUNBP17275 347 aaPredicted RBP13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 ADORA2BP29275 332 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 EPS8Q12929 822 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 GRB7Q14451 532 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 CTU2Q2VPK5 515 aaKnown RBP13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 SIGIRRQ6IA17 410 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 ZDHHC13Q8IUH4 622 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 MCOLN3Q8TDD5 553 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 BIRC7Q96CA5 298 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 NSMCE2Q96MF7 247 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 GPR22Q99680 433 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 RHOBTB2Q9BYZ6 727 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 PAQR5Q9NXK6 330 aaPredicted RBP13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 SARDHQ9UL12 918 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 SATB2Q9UPW6 733 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms