RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 TNNT3P45378 269 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-233ENST00000495899 FOXC1Q12948 553 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 MPP3Q13368 585 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 ELOCQ15369 112 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 RPS6KA1Q15418 735 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 PCSK7Q16549 785 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 ALG11Q2TAA5 492 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 DARS2Q6PI48 645 aaKnown RBP12.34□□□□□ -0.43
MRPL55-233ENST00000495899 LVRNQ6Q4G3 990 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 RAB44Q7Z6P3 723 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-233ENST00000495899 SPNS2Q8IVW8 549 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 FSTL5Q8N475 847 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-233ENST00000495899 TRIM58Q8NG06 486 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 OR56A4Q8NGH8 313 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 AP2M1Q96CW1 435 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 SMIM14Q96QK8 99 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 FRMD8P1Q9BZ68 369 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-233ENST00000495899 CARD9Q9H257 536 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 PHPT1Q9NRX4 125 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-233ENST00000495899 RAD18Q9NS91 495 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 KLQ9UEF7 1012 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 RSPH14Q9UHP6 348 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 PNMA8BQ9ULN7 279 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-233ENST00000495899 PPP2R2CQ9Y2T4 447 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 KNL1Q8NG31 2342 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 CNOT1A5YKK6 2376 aaKnown RBP12.34□□□□□ -0.43
MRPL55-233ENST00000495899 NCOR2Q9Y618 2525 aa12.34□□□□□ -0.43
MRPL55-233ENST00000495899 TMEM202A6NGA9 273 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 LMO7DNF2Z398 122 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 K7ESM1 405 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 KCNN4O15554 427 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 TNFP01375 233 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 CKMT1AP12532 417 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 CTSEP14091 401 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 ACP1P24666 158 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 SPINT3P49223 89 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 WNT3AP56704 352 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 GALNT3Q14435 633 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 PRRT3Q5FWE3 981 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 ANKRD20A2Q5SQ80 823 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 ANKRD20A1Q5TYW2 823 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 ANKRD20A3Q5VUR7 823 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 ZCCHC8Q6NZY4 707 aaKnown RBP12.33□□□□□ -0.44
MRPL55-233ENST00000495899 KDELC1Q6UW63 502 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 ADAMTSL4Q6UY14 1074 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 KDELC2Q7Z4H8 507 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 TMC3Q7Z5M5 1100 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 HID1Q8IV36 788 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 LMX1AQ8TE12 382 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 LGR4Q9BXB1 951 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 ABCG8Q9H221 673 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 GBA3Q9H227 469 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 TRABDQ9H4I3 376 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 ZFYVE1Q9HBF4 777 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 EVA1BQ9NVM1 165 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 UBP1Q9NZI7 540 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 PKD2L2Q9NZM6 624 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 AAR2Q9Y312 384 aaKnown RBP12.33□□□□□ -0.44
MRPL55-233ENST00000495899 NEUROG3Q9Y4Z2 214 aa12.33□□□□□ -0.44
MRPL55-233ENST00000495899 A0A0U1RQS6 177 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 C5orf60A6NFR6 353 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 FFAR2O15552 330 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 GCATO75600 419 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 HLA-DPA1P20036 260 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 STIP1P31948 543 aaKnown RBP12.32□□□□□ -0.44
MRPL55-233ENST00000495899 GPR1P46091 355 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 DUSP3P51452 185 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-233ENST00000495899 GEMP55040 296 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 CDK3Q00526 305 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 PRPSAP1Q14558 356 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 FAM182AQ5T1J6 154 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 SEL1L2Q5TEA6 688 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 RAET1GQ6H3X3 334 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 RD3Q7Z3Z2 195 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 HEATR4Q86WZ0 1026 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 RBFAQ8N0V3 343 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 PELI3Q8N2H9 469 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 CHCHD4Q8N4Q1 142 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 PNPLA1Q8N8W4 532 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 SLC35B2Q8TB61 432 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 SCG3Q8WXD2 468 aaKnown RBP12.32□□□□□ -0.44
MRPL55-233ENST00000495899 SCAMP4Q969E2 229 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 TSACCQ96A04 125 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-233ENST00000495899 OXNAD1Q96HP4 312 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-233ENST00000495899 MRGPRX2Q96LB1 330 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 SPATA13Q96N96 652 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 LRRC61Q9BV99 259 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 TCEAL2Q9H3H9 227 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-233ENST00000495899 FAM83DQ9H4H8 585 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 C10orf88Q9H8K7 445 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 HACD3Q9P035 362 aa12.32□□□□□ -0.44
MRPL55-233ENST00000495899 NFKBIL1Q9UBC1 381 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-233ENST00000495899 COL5A1P20908 1838 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-233ENST00000495899 PCNX2A6NKB5 2137 aa12.31□□□□□ -0.44
MRPL55-233ENST00000495899 SHROOM3Q8TF72 1996 aa12.31□□□□□ -0.44
MRPL55-233ENST00000495899 YY2O15391 372 aa12.31□□□□□ -0.44
MRPL55-233ENST00000495899 HYAL3O43820 417 aaPredicted RBP12.31□□□□□ -0.44
MRPL55-233ENST00000495899 RFPL3O75679 317 aa12.31□□□□□ -0.44
MRPL55-233ENST00000495899 SOD1P00441 154 aa12.31□□□□□ -0.44
MRPL55-233ENST00000495899 CEACAM5P06731 702 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms