RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 XAB2Q9HCS7 855 aaKnown RBP17.05■□□□□ 0.32
HDAC6-235ENST00000495515 PHPT1Q9NRX4 125 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-235ENST00000495515 GON4LQ3T8J9 2241 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 EFCAB8A8MWE9 144 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 DFNA5O60443 496 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 CER1O95813 267 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 HOXC4P09017 264 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-235ENST00000495515 MLNP12872 115 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 BPIP17213 487 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 KELP23276 732 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 ADRA1DP25100 572 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 TRIM23P36406 574 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 SPAM1P38567 509 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 HADHAP40939 763 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 GRIA1P42261 906 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 GRIK2Q13002 908 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 MSLNQ13421 630 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-235ENST00000495515 PDE1CQ14123 709 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-235ENST00000495515 KIF19Q2TAC6 998 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 IZUMO3Q5VZ72 239 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 ARMC3Q5W041 872 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 PDPK2PQ6A1A2 396 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 LAYNQ6UX15 382 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 PRR23CQ6ZRP0 262 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 HOOK3Q86VS8 718 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 DTX3LQ8TDB6 740 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 SCAMP4Q969E2 229 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 SNF8Q96H20 258 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 ZSCAN5AQ9BUG6 496 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 APOOQ9BUR5 198 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 FRMD8Q9BZ67 464 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-235ENST00000495515 IL22Q9GZX6 179 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 RAB17Q9H0T7 212 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 BPIFA1Q9NP55 256 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 PIH1D1Q9NWS0 290 aaKnown RBP17.04■□□□□ 0.32
HDAC6-235ENST00000495515 UTP11Q9Y3A2 253 aaKnown RBP17.04■□□□□ 0.32
HDAC6-235ENST00000495515 ARL5AQ9Y689 179 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 CEP192Q8TEP8 1941 aa17.04■□□□□ 0.32
HDAC6-235ENST00000495515 ZFHX2Q9C0A1 2572 aaPredicted RBP17.03■□□□□ 0.32
HDAC6-235ENST00000495515 RAD51CO43502 376 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 ENGP17813 658 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 CTSKP43235 329 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 SESN2P58004 480 aaPredicted RBP17.03■□□□□ 0.32
HDAC6-235ENST00000495515 MORF4L2Q15014 288 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 SF3A2Q15428 464 aaKnown RBP17.03■□□□□ 0.32
HDAC6-235ENST00000495515 KCTD19Q17RG1 926 aaPredicted RBP17.03■□□□□ 0.32
HDAC6-235ENST00000495515 SKIDA1Q1XH10 827 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 AASDHQ4L235 1098 aaPredicted RBP17.03■□□□□ 0.32
HDAC6-235ENST00000495515 CERCAMQ5T4B2 595 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 HENMT1Q5T8I9 393 aaKnown RBP17.03■□□□□ 0.32
HDAC6-235ENST00000495515 RNASEH2BQ5TBB1 312 aaKnown RBP17.03■□□□□ 0.32
HDAC6-235ENST00000495515 ALS2CLQ60I27 953 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 TCEAL6Q6IPX3 200 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 C8orf74Q6P047 294 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 ADAMTSL4Q6UY14 1074 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 RFLNAQ6ZTI6 216 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 TRAM1L1Q8N609 369 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 NAT8LQ8N9F0 302 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 PLA2G15Q8NCC3 412 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 GPR26Q8NDV2 337 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 PPHLN1Q8NEY8 458 aaKnown RBP17.03■□□□□ 0.32
HDAC6-235ENST00000495515 OR4K2Q8NGD2 314 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 STYXQ8WUJ0 223 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 TCEAL3Q969E4 200 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 RANBP9Q96S59 729 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 ERP44Q9BS26 406 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 TRIM51Q9BSJ1 452 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 GTPBP2Q9BX10 602 aaKnown RBP17.03■□□□□ 0.32
HDAC6-235ENST00000495515 SPATA16Q9BXB7 569 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 ERVMER34-1Q9H9K5 563 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 PARD6AQ9NPB6 346 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 APPL1Q9UKG1 709 aa17.03■□□□□ 0.32
HDAC6-235ENST00000495515 PTPRZ1P23471 2315 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-235ENST00000495515 OTOGLQ3ZCN5 2332 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 RIF1Q5UIP0 2472 aaKnown RBP17.02■□□□□ 0.32
HDAC6-235ENST00000495515 GLYATL1P3A0A0U1RQE8 302 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 SPTY2D1-AS1A0A0U1RR47 76 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 TCRBV7S3A2A0A539 114 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 LNP1A1A4G5 178 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 LDB2O43679 373 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 BUD23O43709 281 aaKnown RBP17.02■□□□□ 0.32
HDAC6-235ENST00000495515 TMEM63AO94886 807 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 MYCLP1P12525 358 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-235ENST00000495515 ARRB1P49407 418 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-235ENST00000495515 KIAA1024LP59773 190 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 NFATC4Q14934 902 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 PCID2Q5JVF3 399 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 ANKRD22Q5VYY1 191 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 MACC1Q6ZN28 852 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 HEATR4Q86WZ0 1026 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 PTCD2Q8WV60 388 aaKnown RBP17.02■□□□□ 0.32
HDAC6-235ENST00000495515 PEX13Q92968 403 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 TEX101Q9BY14 249 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 TRIM31Q9BZY9 425 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 GPR27Q9NS67 375 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 RIMKLBQ9ULI2 386 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 OR1A2Q9Y585 309 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 SNX11Q9Y5W9 270 aa17.02■□□□□ 0.32
HDAC6-235ENST00000495515 TNRC6BQ9UPQ9 1833 aaKnown RBP17.02■□□□□ 0.31
HDAC6-235ENST00000495515 USP34Q70CQ2 3546 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms