RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 LGI1O95970 557 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 CKMP06732 381 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 HSPD1P10809 573 aaKnown RBP9.34□□□□□ -0.91
RPSA-209ENST00000495394 KLRK1P26718 216 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 STX2P32856 288 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 MCAMP43121 646 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 CLCNKBP51801 687 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 ANTXR2P58335 489 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 ARF3P61204 181 aaPredicted RBP9.34□□□□□ -0.91
RPSA-209ENST00000495394 ARF1P84077 181 aaKnown RBP9.34□□□□□ -0.91
RPSA-209ENST00000495394 CREMQ03060 361 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 THOC5Q13769 683 aaKnown RBP9.34□□□□□ -0.91
RPSA-209ENST00000495394 PCBP2Q15366 365 aaKnown RBP eCLIP9.34□□□□□ -0.91
RPSA-209ENST00000495394 TMEM119Q4V9L6 283 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 EPC2Q52LR7 807 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 GLE1Q53GS7 698 aaKnown RBP9.34□□□□□ -0.91
RPSA-209ENST00000495394 EXOSC6Q5RKV6 272 aaKnown RBP9.34□□□□□ -0.91
RPSA-209ENST00000495394 C6orf10Q5SRN2 563 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 NBPF12Q5TAG4 269 aaPredicted RBP9.34□□□□□ -0.91
RPSA-209ENST00000495394 GALNT18Q6P9A2 607 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 RSBN1LQ6PCB5 846 aaPredicted RBP9.34□□□□□ -0.91
RPSA-209ENST00000495394 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.34□□□□□ -0.91
RPSA-209ENST00000495394 GPR149Q86SP6 731 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 C12orf40Q86WS4 652 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 ZFAND4Q86XD8 727 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 CPOQ8IVL8 374 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 SULF2Q8IWU5 870 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 CYP4Z2PQ8N1L4 340 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 PSPC1Q8WXF1 523 aaKnown RBP9.34□□□□□ -0.91
RPSA-209ENST00000495394 PIGKQ92643 395 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 PRCCQ92733 491 aaPredicted RBP9.34□□□□□ -0.91
RPSA-209ENST00000495394 NT5C3BQ969T7 300 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 TEKT5Q96M29 485 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 COA1Q9GZY4 146 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 C17orf75Q9HAS0 396 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 MAGEE1Q9HCI5 957 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 TXLNGQ9NUQ3 528 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 PANK4Q9NVE7 773 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 ARL8BQ9NVJ2 186 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 EVA1BQ9NVM1 165 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 MARK1Q9P0L2 795 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 SLC24A2Q9UI40 661 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 DOLKQ9UPQ8 538 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 CLCA2Q9UQC9 943 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 AKAP11Q9UKA4 1901 aa9.34□□□□□ -0.91
RPSA-209ENST00000495394 CD3GP09693 182 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 PTPREP23469 700 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 F8A1P23610 371 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 ID4P47928 161 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 DNM2P50570 870 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 ZNF81P51508 661 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 NFYCQ13952 458 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 ZNF267Q14586 743 aaPredicted RBP9.33□□□□□ -0.92
RPSA-209ENST00000495394 ETFDHQ16134 617 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 CTXN3Q4LDR2 81 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 C2CD6Q53TS8 623 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 ATXN7L2Q5T6C5 722 aaPredicted RBP9.33□□□□□ -0.92
RPSA-209ENST00000495394 PRAMEF20Q5VT98 475 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 SLC9A4Q6AI14 798 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 NIPA1Q7RTP0 329 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 HEATR3Q7Z4Q2 680 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 RCOR2Q8IZ40 523 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 AGGF1Q8N302 714 aaeCLIP9.33□□□□□ -0.92
RPSA-209ENST00000495394 PCDH20Q8N6Y1 951 aaKnown RBP9.33□□□□□ -0.92
RPSA-209ENST00000495394 OR13C3Q8NGS6 347 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 TPCN2Q8NHX9 752 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 CHTF18Q8WVB6 975 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 PYDC1Q8WXC3 89 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 MCRS1Q96EZ8 462 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 EAF1Q96JC9 268 aaPredicted RBP9.33□□□□□ -0.92
RPSA-209ENST00000495394 THUMPD3Q9BV44 507 aaKnown RBP9.33□□□□□ -0.92
RPSA-209ENST00000495394 C1QTNF3Q9BXJ4 246 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 UNKLQ9H9P5 680 aaKnown RBP9.33□□□□□ -0.92
RPSA-209ENST00000495394 CAB39LQ9H9S4 337 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 H2AFY2Q9P0M6 372 aaPredicted RBP9.33□□□□□ -0.92
RPSA-209ENST00000495394 ZNRF3Q9ULT6 936 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 RUVBL2Q9Y230 463 aaKnown RBP9.33□□□□□ -0.92
RPSA-209ENST00000495394 LRRC53A6NM62 1247 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 KPNA7A9QM74 516 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 PSMA7O14818 248 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 SLC16A6O15403 523 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 TBC1D4O60343 1298 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 GMDSO60547 372 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 OR7A10O76100 309 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 NQO1P15559 274 aaKnown RBP9.33□□□□□ -0.92
RPSA-209ENST00000495394 MPSTP25325 297 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 HOXA9P31269 272 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 CDK7P50613 346 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 ARSEP51690 589 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 RAD23AP54725 363 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 ZP2Q05996 745 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 SLC3A1Q07837 685 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 KCNH2Q12809 1159 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 NOGQ13253 232 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 TRA2AQ13595 282 aaKnown RBP eCLIP9.33□□□□□ -0.92
RPSA-209ENST00000495394 ACVR2BQ13705 512 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 COL9A2Q14055 689 aaPredicted RBP9.33□□□□□ -0.92
RPSA-209ENST00000495394 SEC23BQ15437 767 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 DUSP7Q16829 419 aa9.33□□□□□ -0.92
RPSA-209ENST00000495394 TNFAIP8L3Q5GJ75 292 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms