RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	ATP6V0D1	P61421	351 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	ECT2L	Q008S8	904 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	UPP1	Q16831	310 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	RABL3	Q5HYI8	236 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	CYHR1	Q6ZMK1	362 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	ALDH16A1	Q8IZ83	802 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	FBXO39	Q8N4B4	442 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	DHRSX	Q8N5I4	330 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	BRI3BP	Q8WY22	251 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	LZIC	Q8WZA0	190 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	ZUFSP	Q96AP4	578 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	ARL5A	Q9Y689	179 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	CLASP2	O75122	1294 aa	Known RBP	13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	CHEK2	O96017	543 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	DIO3	P55073	304 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	EFEMP1	Q12805	493 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	GALNT3	Q14435	633 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	ZNF235	Q14590	738 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	GPR107	Q5VW38	600 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	TAF2	Q6P1X5	1199 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	AGMO	Q6ZNB7	445 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	ISOC1	Q96CN7	298 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	SEMA3C	Q99985	751 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	POLR1B	Q9H9Y6	1135 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	DNAAF2	Q9NVR5	837 aa	Known RBP	13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	CMTM6	Q9NX76	183 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	CDC14A	Q9UNH5	594 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	FADS3	Q9Y5Q0	445 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	COMMD10	Q9Y6G5	202 aa		13.4	□□□□□ -0.26
SUPT20H-222	ENST00000495071	MAGEB3	O15480	346 aa		13.4	□□□□□ -0.27
SUPT20H-222	ENST00000495071	CNTN5	O94779	1100 aa		13.4	□□□□□ -0.27
SUPT20H-222	ENST00000495071	BMP10	O95393	424 aa		13.4	□□□□□ -0.27
SUPT20H-222	ENST00000495071	CD1D	P15813	335 aa		13.4	□□□□□ -0.27
SUPT20H-222	ENST00000495071	CES1	P23141	567 aa		13.4	□□□□□ -0.27
SUPT20H-222	ENST00000495071	TBX4	P57082	545 aa		13.4	□□□□□ -0.27
SUPT20H-222	ENST00000495071	NEDD8	Q15843	81 aa		13.4	□□□□□ -0.27
SUPT20H-222	ENST00000495071	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.4	□□□□□ -0.27
SUPT20H-222	ENST00000495071	CMTR2	Q8IYT2	770 aa	Known RBP	13.4	□□□□□ -0.27
SUPT20H-222	ENST00000495071	C12orf43	Q96C57	262 aa	Known RBP	13.4	□□□□□ -0.27
SUPT20H-222	ENST00000495071	ZYG11B	Q9C0D3	744 aa		13.4	□□□□□ -0.27
SUPT20H-222	ENST00000495071	ARNT2	Q9HBZ2	717 aa		13.4	□□□□□ -0.27
SUPT20H-222	ENST00000495071	LMCD1	Q9NZU5	365 aa		13.4	□□□□□ -0.27
SUPT20H-222	ENST00000495071	ACTR3B	Q9P1U1	418 aa		13.4	□□□□□ -0.27
SUPT20H-222	ENST00000495071	ANKRD12	Q6UB98	2062 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	PAPSS2	O95340	614 aa	Predicted RBP	13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	IGLV3-25	P01717	112 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	IDO1	P14902	403 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	SLC6A2	P23975	617 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	ENTPD1	P49961	510 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	OR4D1	Q15615	310 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	KCTD21	Q4G0X4	260 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	MANEAL	Q5VSG8	457 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	FAM171B	Q6P995	826 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	PACRGL	Q8N7B6	248 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	OR13C4	Q8NGS5	318 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	DUS3L	Q96G46	650 aa	Known RBP	13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	ALG2	Q9H553	416 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	CXorf21	Q9HAI6	301 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	PKD2L2	Q9NZM6	624 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	RGS17	Q9UGC6	210 aa	Predicted RBP	13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	POLG2	Q9UHN1	485 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	CPA4	Q9UI42	421 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	GIT1	Q9Y2X7	761 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	TRPV2	Q9Y5S1	764 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	TRIP12	Q14669	1992 aa	Predicted RBP	13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	CCDC162P	A2VCL2	907 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	UNCX	A6NJT0	531 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	FCGR1A	P12314	374 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	HOXC13	P31276	330 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	MAPK10	P53779	464 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	CLC	Q05315	142 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	PLCL1	Q15111	1095 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	RBBP7	Q16576	425 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	ZBED5	Q49AG3	693 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	ALF	Q53S48	1182 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	TMTC4	Q5T4D3	741 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	PIK3R6	Q5UE93	754 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	KLHL35	Q6PF15	583 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	SCD5	Q86SK9	330 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	SEPT8	Q92599	483 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	RPRD1A	Q96P16	312 aa	Predicted RBP	13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	PARK7	Q99497	189 aa	Known RBP	13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	C1orf50	Q9BV19	199 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	SOX17	Q9H6I2	414 aa	Predicted RBP	13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	ANAPC2	Q9UJX6	822 aa		13.39	□□□□□ -0.27
SUPT20H-222	ENST00000495071	FOXD2	O60548	495 aa	Predicted RBP	13.38	□□□□□ -0.27
SUPT20H-222	ENST00000495071	FMO4	P31512	558 aa		13.38	□□□□□ -0.27
SUPT20H-222	ENST00000495071	SLC26A3	P40879	764 aa		13.38	□□□□□ -0.27
SUPT20H-222	ENST00000495071	CREB5	Q02930	508 aa		13.38	□□□□□ -0.27
SUPT20H-222	ENST00000495071	LIPE	Q05469	1076 aa		13.38	□□□□□ -0.27
SUPT20H-222	ENST00000495071	FSCN1	Q16658	493 aa	Known RBP	13.38	□□□□□ -0.27
SUPT20H-222	ENST00000495071	UGT3A2	Q3SY77	523 aa		13.38	□□□□□ -0.27
SUPT20H-222	ENST00000495071	SLC39A12	Q504Y0	691 aa		13.38	□□□□□ -0.27
SUPT20H-222	ENST00000495071	INTS11	Q5TA45	600 aa	Known RBP	13.38	□□□□□ -0.27
SUPT20H-222	ENST00000495071	ANKS6	Q68DC2	871 aa		13.38	□□□□□ -0.27
SUPT20H-222	ENST00000495071	ABRAXAS1	Q6UWZ7	409 aa		13.38	□□□□□ -0.27
SUPT20H-222	ENST00000495071	CIR1	Q86X95	450 aa	Predicted RBP	13.38	□□□□□ -0.27
SUPT20H-222	ENST00000495071	EPHX4	Q8IUS5	362 aa		13.38	□□□□□ -0.27
SUPT20H-222	ENST00000495071	MINDY1	Q8N5J2	469 aa		13.38	□□□□□ -0.27
SUPT20H-222	ENST00000495071	OSBPL6	Q9BZF3	934 aa		13.38	□□□□□ -0.27

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