RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	SLC26A11	Q86WA9	606 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	C1orf210	Q8IVY1	113 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.51	□□□□□ -0.25
APTX-231	ENST00000494973	TRAM1L1	Q8N609	369 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	OR6P1	Q8NGX9	317 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	HEXDC	Q8WVB3	486 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	CDKN2AIPNL	Q96HQ2	116 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	SLC6A17	Q9H1V8	727 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	ACBD3	Q9H3P7	528 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	ACSS3	Q9H6R3	686 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	PPAN	Q9NQ55	473 aa	Known RBP	13.51	□□□□□ -0.25
APTX-231	ENST00000494973	SMOX	Q9NWM0	555 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	MOCS1	Q9NZB8	636 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	SERGEF	Q9UGK8	458 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	DMTF1	Q9Y222	760 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	ITM2B	Q9Y287	266 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	IKBKG	Q9Y6K9	419 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	BDP1	A6H8Y1	2624 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	SCN8A	Q9UQD0	1980 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973	PLXND1	Q9Y4D7	1925 aa		13.51	□□□□□ -0.25
APTX-231	ENST00000494973		A0A1W2PQU0	124 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	PLK4	O00444	970 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	TOR1B	O14657	336 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	AURKA	O14965	403 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	RNGTT	O60942	597 aa	Known RBP	13.5	□□□□□ -0.25
APTX-231	ENST00000494973	RECQL5	O94762	991 aa	Predicted RBP	13.5	□□□□□ -0.25
APTX-231	ENST00000494973	VAPB	O95292	243 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	PRAMEF1	O95521	474 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	BPI	P17213	487 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	SSTR1	P30872	391 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	MC4R	P32245	332 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	HSD17B3	P37058	310 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	TTPA	P49638	278 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	TMEM259	Q4ZIN3	620 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	FBXO38	Q6PIJ6	1188 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	HDX	Q7Z353	690 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	HSD11B1L	Q7Z5J1	315 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	SNX20	Q7Z614	316 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	TECPR1	Q7Z6L1	1165 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	GALNT7	Q86SF2	657 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	FAM124A	Q86V42	546 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	WDR5B	Q86VZ2	330 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	IGDCC3	Q8IVU1	814 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	CNTN4	Q8IWV2	1026 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	OTUD6B	Q8N6M0	293 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	DTWD2	Q8NBA8	298 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	CADM4	Q8NFZ8	388 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	OR13C4	Q8NGS5	318 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	GPR150	Q8NGU9	434 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	OR4L1	Q8NH43	312 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	FAM174A	Q8TBP5	190 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	HDAC10	Q969S8	669 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	AP2M1	Q96CW1	435 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	TOE1	Q96GM8	510 aa	Known RBP	13.5	□□□□□ -0.25
APTX-231	ENST00000494973	RUFY1	Q96T51	708 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	TCF12	Q99081	682 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	C1QTNF2	Q9BXJ5	285 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	CATSPERZ	Q9NTU4	200 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	WSB2	Q9NYS7	404 aa	Predicted RBP	13.5	□□□□□ -0.25
APTX-231	ENST00000494973	FKBPL	Q9UIM3	349 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	CYP8B1	Q9UNU6	501 aa		13.5	□□□□□ -0.25
APTX-231	ENST00000494973	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	EXOC1L	A0A1B0GW35	172 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	FAM159B	A6NKW6	160 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973		A8MX80	341 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	PI15	O43692	258 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	MMP20	O60882	483 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	SRP72	O76094	671 aa	Known RBP	13.49	□□□□□ -0.25
APTX-231	ENST00000494973	GOT2	P00505	430 aa	Known RBP	13.49	□□□□□ -0.25
APTX-231	ENST00000494973	PML	P29590	882 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	CNR2	P34972	360 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	ARCN1	P48444	511 aa	Known RBP	13.49	□□□□□ -0.25
APTX-231	ENST00000494973	GPX6	P59796	221 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	TMPRSS15	P98073	1019 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	IFFO1	Q0D2I5	559 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	NFATC2	Q13469	925 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	SLC29A2	Q14542	456 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	ZNF528	Q3MIS6	628 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	HENMT1	Q5T8I9	393 aa	Known RBP	13.49	□□□□□ -0.25
APTX-231	ENST00000494973	ALS2CL	Q60I27	953 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	KIAA0895L	Q68EN5	471 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	NEPRO	Q6NW34	567 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	CAPN12	Q6ZSI9	719 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	MARK2	Q7KZI7	788 aa	Known RBP	13.49	□□□□□ -0.25
APTX-231	ENST00000494973	LONP2	Q86WA8	852 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	LRRC6	Q86X45	466 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	RIBC1	Q8N443	379 aa	Predicted RBP	13.49	□□□□□ -0.25
APTX-231	ENST00000494973	FBF1	Q8TES7	1133 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	FOXJ1	Q92949	421 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	TBATA	Q96M53	351 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	ZNF778	Q96MU6	729 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	FCRL3	Q96P31	734 aa	Predicted RBP	13.49	□□□□□ -0.25
APTX-231	ENST00000494973	VPS35	Q96QK1	796 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	SMIM14	Q96QK8	99 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	SPATA16	Q9BXB7	569 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	TPSD1	Q9BZJ3	242 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	ZCCHC2	Q9C0B9	1178 aa	Known RBP	13.49	□□□□□ -0.25
APTX-231	ENST00000494973	VIPAS39	Q9H9C1	493 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	BPIFA1	Q9NP55	256 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	IL26	Q9NPH9	171 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms