RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ADAMTSL4Q6UY14 1074 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 NAGSQ8N159 534 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 NUDT22Q9BRQ3 303 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 CDH19Q9H159 772 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 ST14Q9Y5Y6 855 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 ASH1LQ9NR48 2969 aaKnown RBP23.15■■□□□ 1.3
COL27A1-208ENST00000494780 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.15■■□□□ 1.3
COL27A1-208ENST00000494780 CD1CP29017 333 aa23.15■■□□□ 1.3
COL27A1-208ENST00000494780 KRT81Q14533 505 aa23.15■■□□□ 1.3
COL27A1-208ENST00000494780 LINC00303Q3SY05 128 aa23.15■■□□□ 1.3
COL27A1-208ENST00000494780 ZNF574Q6ZN55 896 aaPredicted RBP23.15■■□□□ 1.3
COL27A1-208ENST00000494780 NLRP8Q86W28 1048 aa23.15■■□□□ 1.3
COL27A1-208ENST00000494780 EXD3Q8N9H8 876 aa23.15■■□□□ 1.3
COL27A1-208ENST00000494780 FAM71BQ8TC56 605 aa23.15■■□□□ 1.3
COL27A1-208ENST00000494780 PATE1Q8WXA2 126 aa23.15■■□□□ 1.3
COL27A1-208ENST00000494780 SYN2Q92777 582 aaPredicted RBP23.15■■□□□ 1.3
COL27A1-208ENST00000494780 AP2M1Q96CW1 435 aa23.15■■□□□ 1.3
COL27A1-208ENST00000494780 SEMA3CQ99985 751 aa23.15■■□□□ 1.3
COL27A1-208ENST00000494780 POLR1EQ9GZS1 481 aaKnown RBP23.15■■□□□ 1.3
COL27A1-208ENST00000494780 THAP2Q9H0W7 228 aa23.15■■□□□ 1.3
COL27A1-208ENST00000494780 ABCG8Q9H221 673 aa23.15■■□□□ 1.3
COL27A1-208ENST00000494780 ANAPC7Q9UJX3 599 aa23.15■■□□□ 1.3
COL27A1-208ENST00000494780 IGHV5-10-1A0A0J9YXX1 117 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 SOD1P00441 154 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 SERPINC1P01008 464 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 PYGLP06737 847 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 PDHA1P08559 390 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 ZNF30P17039 623 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 IL4RP24394 825 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 ACTR1BP42025 376 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 ACTR1AP61163 376 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 SQSTM1Q13501 440 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 TRA2AQ13595 282 aaKnown RBP eCLIP23.14■■□□□ 1.29
COL27A1-208ENST00000494780 LRRC66Q68CR7 880 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 DOK6Q6PKX4 331 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 ZNF765Q7L2R6 523 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 ZSCAN1Q8NBB4 408 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 BTBD6Q96KE9 485 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 OR2M4Q96R27 311 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 DPYSL5Q9BPU6 564 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 NUP85Q9BW27 656 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 CD84Q9UIB8 345 aa23.14■■□□□ 1.29
COL27A1-208ENST00000494780 A0A0J9YYE9 177 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 A0A1W2PQJ5 194 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 PPM1DO15297 605 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 TRBC1P01850 177 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 CYP1A2P05177 515 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 CCL4P13236 92 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 CES1P23141 567 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 LIMK2P53671 638 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 PTSQ03393 145 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 ITKQ08881 620 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 ALG1LQ6GMV1 187 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 RFLNAQ6ZTI6 216 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 VASH2Q86V25 355 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 RCBTB1Q8NDN9 531 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 OR4D9Q8NGE8 314 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 MAML1Q92585 1016 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 CCDC74BQ96LY2 380 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 ARHGAP9Q9BRR9 750 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 DNPEPQ9ULA0 475 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 TMEM98Q9Y2Y6 226 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 PCDHGA4Q9Y5G9 962 aa23.13■■□□□ 1.29
COL27A1-208ENST00000494780 A0A0U1RQS6 177 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 MYO1FO00160 1098 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 SLC28A2O43868 658 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 GARSP41250 739 aaKnown RBP23.12■■□□□ 1.29
COL27A1-208ENST00000494780 GALNT2Q10471 571 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 MMRN1Q13201 1228 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 LRP8Q14114 963 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 IQCB1Q15051 598 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 HADHQ16836 314 aaKnown RBP23.12■■□□□ 1.29
COL27A1-208ENST00000494780 PYCR3Q53H96 274 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 CCDC122Q5T0U0 273 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 TENM4Q6N022 2769 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 TIGD7Q6NT04 549 aaPredicted RBP23.12■■□□□ 1.29
COL27A1-208ENST00000494780 RAVER1Q8IY67 606 aaKnown RBP23.12■■□□□ 1.29
COL27A1-208ENST00000494780 EXTL1Q92935 676 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 SCAMP4Q969E2 229 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 TAAR9Q96RI9 348 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 HAUS2Q9NVX0 235 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 AMACRQ9UHK6 382 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 PLEKHM1Q9Y4G2 1056 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 PCDHGA3Q9Y5H0 932 aa23.12■■□□□ 1.29
COL27A1-208ENST00000494780 IGHV1OR21-1A0A087WYE8 117 aa23.11■■□□□ 1.29
COL27A1-208ENST00000494780 STMND1H3BQB6 276 aa23.11■■□□□ 1.29
COL27A1-208ENST00000494780 MATN3O15232 486 aa23.11■■□□□ 1.29
COL27A1-208ENST00000494780 MFSD11O43934 449 aa23.11■■□□□ 1.29
COL27A1-208ENST00000494780 SERPING1P05155 500 aa23.11■■□□□ 1.29
COL27A1-208ENST00000494780 CD48P09326 243 aa23.11■■□□□ 1.29
COL27A1-208ENST00000494780 SSR1P43307 286 aaKnown RBP23.11■■□□□ 1.29
COL27A1-208ENST00000494780 STC1P52823 247 aa23.11■■□□□ 1.29
COL27A1-208ENST00000494780 EPHB1P54762 984 aa23.11■■□□□ 1.29
COL27A1-208ENST00000494780 PAFAH1B3Q15102 231 aaKnown RBP23.11■■□□□ 1.29
COL27A1-208ENST00000494780 NRSN1Q8IZ57 195 aa23.11■■□□□ 1.29
COL27A1-208ENST00000494780 FATE1Q969F0 183 aa23.11■■□□□ 1.29
COL27A1-208ENST00000494780 SMIM14Q96QK8 99 aa23.11■■□□□ 1.29
COL27A1-208ENST00000494780 KCNK4Q9NYG8 393 aa23.11■■□□□ 1.29
COL27A1-208ENST00000494780 FGF3P11487 239 aaPredicted RBP23.1■■□□□ 1.29
COL27A1-208ENST00000494780 CA4P22748 312 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms