RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 FAM92AA1XBS5 289 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 RAMP2O60895 175 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 SOAT2O75908 522 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 SUPT7LO94864 414 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 EOMESO95936 686 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 TFAP2AP05549 437 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 SERPINF2P08697 491 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 CSF2RAP15509 400 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 ZNF37AP17032 561 aaPredicted RBP11.47□□□□□ -0.57
RFC4-214ENST00000494047 CDK9P50750 372 aaKnown RBP11.47□□□□□ -0.57
RFC4-214ENST00000494047 RPS6KA3P51812 740 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 PKNOX1P55347 436 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 SMAD3P84022 425 aaKnown RBP11.47□□□□□ -0.57
RFC4-214ENST00000494047 RAD51Q06609 339 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 MGAT3Q09327 533 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 OLIG2Q13516 323 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 IKBKEQ14164 716 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 ZNF235Q14590 738 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 RPS6KA2Q15349 733 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 GEN1Q17RS7 908 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 SMU1Q2TAY7 513 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 MGAT5BQ3V5L5 792 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 KANK2Q63ZY3 851 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 UGT3A1Q6NUS8 523 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 METTL2BQ6P1Q9 378 aaKnown RBP11.47□□□□□ -0.57
RFC4-214ENST00000494047 CNSTQ6PJW8 725 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 AGMOQ6ZNB7 445 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 ZBTB49Q6ZSB9 765 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 ZNF354CQ86Y25 554 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 ERI1Q8IV48 349 aaKnown RBP11.47□□□□□ -0.57
RFC4-214ENST00000494047 HERC6Q8IVU3 1022 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 TBC1D21Q8IYX1 336 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 STK40Q8N2I9 435 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 ADAMTS16Q8TE57 1224 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 OSCP1Q8WVF1 389 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 ATP6V1E2Q96A05 226 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 PPWD1Q96BP3 646 aaKnown RBP11.47□□□□□ -0.57
RFC4-214ENST00000494047 CNDP2Q96KP4 475 aaKnown RBP11.47□□□□□ -0.57
RFC4-214ENST00000494047 RDH12Q96NR8 316 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 NPAS2Q99743 824 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 RTP3Q9BQQ7 232 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 SDR39U1Q9NRG7 319 aaPredicted RBP11.47□□□□□ -0.57
RFC4-214ENST00000494047 CATSPERZQ9NTU4 200 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 SUN2Q9UH99 717 aa11.47□□□□□ -0.57
RFC4-214ENST00000494047 RSL24D1Q9UHA3 163 aaKnown RBP11.47□□□□□ -0.57
RFC4-214ENST00000494047 LAMA3Q16787 3333 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 A0A0J9YYE9 177 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.46□□□□□ -0.57
RFC4-214ENST00000494047 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.46□□□□□ -0.57
RFC4-214ENST00000494047 DHRS12A0PJE2 317 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 LCHNA4D1U4 455 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 CCDC160A6NGH7 325 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 CASTOR2A6NHX0 329 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 OR6C75A6NL08 312 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 GOLGA8TH3BQL2 631 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 TULP3O75386 442 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 CRCPO75575 148 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 OAZ2O95190 189 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 S1PR4O95977 384 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 FGBP02675 491 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 ASLP04424 464 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 PSMA3P25788 255 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 EEFSECP57772 596 aaKnown RBP11.46□□□□□ -0.57
RFC4-214ENST00000494047 KCNK10P57789 538 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 MS4A2Q01362 244 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 SERINC3Q13530 473 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 NADK2Q4G0N4 442 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 TMEM240Q5SV17 173 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 C9orf50Q5SZB4 431 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 IL23RQ5VWK5 629 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 TMEM198Q66K66 360 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 ANKS6Q68DC2 871 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 RBM44Q6ZP01 1051 aaKnown RBP11.46□□□□□ -0.57
RFC4-214ENST00000494047 GK5Q6ZS86 529 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 SATL1Q86VE3 508 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 PTRH1Q86Y79 214 aaKnown RBP11.46□□□□□ -0.57
RFC4-214ENST00000494047 FAM9CQ8IZT9 166 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 OR13J1Q8NGT2 312 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 OR6P1Q8NGX9 317 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 DNAJB8Q8NHS0 232 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 SEPT8Q92599 483 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 LPGAT1Q92604 370 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 USP13Q92995 863 aaPredicted RBP11.46□□□□□ -0.57
RFC4-214ENST00000494047 KIAA1191Q96A73 305 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 CENPNQ96H22 339 aaPredicted RBP11.46□□□□□ -0.57
RFC4-214ENST00000494047 KLHL32Q96NJ5 620 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 PRPF18Q99633 342 aaKnown RBP11.46□□□□□ -0.57
RFC4-214ENST00000494047 GPATCH1Q9BRR8 931 aaKnown RBP11.46□□□□□ -0.57
RFC4-214ENST00000494047 RBM38Q9H0Z9 239 aaKnown RBP11.46□□□□□ -0.57
RFC4-214ENST00000494047 PIDD1Q9HB75 910 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 NT5MQ9NPB1 228 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 TLR8Q9NR97 1041 aaKnown RBP11.46□□□□□ -0.57
RFC4-214ENST00000494047 IL37Q9NZH6 218 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.46□□□□□ -0.57
RFC4-214ENST00000494047 ZIM2Q9NZV7 527 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 CCDC167Q9P0B6 97 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 TMEM9Q9P0T7 183 aa11.46□□□□□ -0.57
RFC4-214ENST00000494047 LEF1Q9UJU2 399 aaPredicted RBP11.46□□□□□ -0.57
RFC4-214ENST00000494047 TNPO3Q9Y5L0 923 aaKnown RBP11.46□□□□□ -0.57
RFC4-214ENST00000494047 MYLKQ15746 1914 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms