RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 GPR39O43194 453 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 RHOBTB1O94844 696 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 JUNP05412 331 aaKnown RBP10.62□□□□□ -0.71
CLCN6-208ENST00000494028 HNRNPA1P09651 372 aaKnown RBP eCLIP10.62□□□□□ -0.71
CLCN6-208ENST00000494028 ESRRAP11474 423 aaPredicted RBP10.62□□□□□ -0.71
CLCN6-208ENST00000494028 SYN1P17600 705 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 SP100P23497 879 aaPredicted RBP10.62□□□□□ -0.71
CLCN6-208ENST00000494028 PMLP29590 882 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 GKP32189 559 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 EPHB1P54762 984 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 SULT2A1Q06520 285 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 BCL2L1Q07817 233 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 AARS2Q5JTZ9 985 aaKnown RBP10.62□□□□□ -0.71
CLCN6-208ENST00000494028 CFAP157Q5JU67 520 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 SEL1L3Q68CR1 1132 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 TRIM67Q6ZTA4 783 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 FRMD7Q6ZUT3 714 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 SDCCAG8Q86SQ7 713 aaPredicted RBP10.62□□□□□ -0.71
CLCN6-208ENST00000494028 METTL3Q86U44 580 aaKnown RBP10.62□□□□□ -0.71
CLCN6-208ENST00000494028 LONP2Q86WA8 852 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 CAMK1DQ8IU85 385 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 KDM1BQ8NB78 822 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 LEMD2Q8NC56 503 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 FAM13CQ8NE31 585 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 OR2AP1Q8NGE2 309 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 GRIN3AQ8TCU5 1115 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 EID2BQ96D98 161 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 CCDC126Q96EE4 140 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 L3HYPDHQ96EM0 354 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 OR52B2Q96RD2 323 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 ATOH8Q96SQ7 321 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 TCF12Q99081 682 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 CADM1Q9BY67 442 aaKnown RBP10.62□□□□□ -0.71
CLCN6-208ENST00000494028 ILKAPQ9H0C8 392 aaPredicted RBP10.62□□□□□ -0.71
CLCN6-208ENST00000494028 ZNF385DQ9H6B1 395 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 COG4Q9H9E3 785 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 IKZF3Q9UKT9 509 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 SORCS3Q9UPU3 1222 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 APOBEC2Q9Y235 224 aaKnown RBP10.62□□□□□ -0.71
CLCN6-208ENST00000494028 HS3ST2Q9Y278 367 aa10.62□□□□□ -0.71
CLCN6-208ENST00000494028 OAS3Q9Y6K5 1087 aaKnown RBP10.62□□□□□ -0.71
CLCN6-208ENST00000494028 A0A0J9YYE9 177 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 SOBPA7XYQ1 873 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 TMEM233B4DJY2 109 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 NEDD8-MDP1E9PL57 170 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 SPECC1L-ADORA2AF8WAN1 911 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 XYLBO75191 536 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 NIPSNAP2O75323 286 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 NDUFS3O75489 264 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 SRP72O76094 671 aaKnown RBP10.61□□□□□ -0.71
CLCN6-208ENST00000494028 IPO13O94829 963 aaKnown RBP10.61□□□□□ -0.71
CLCN6-208ENST00000494028 SNUPNO95149 360 aaKnown RBP10.61□□□□□ -0.71
CLCN6-208ENST00000494028 TRBC1P01850 177 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 PABPC1P11940 636 aaKnown RBP10.61□□□□□ -0.71
CLCN6-208ENST00000494028 PKMP14618 531 aaKnown RBP10.61□□□□□ -0.71
CLCN6-208ENST00000494028 MYOGP15173 224 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 PTPN2P17706 415 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 TTPAP49638 278 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 RPL14P50914 215 aaKnown RBP10.61□□□□□ -0.71
CLCN6-208ENST00000494028 PDAP1Q13442 181 aaKnown RBP10.61□□□□□ -0.71
CLCN6-208ENST00000494028 OR4D1Q15615 310 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 PDCD2Q16342 344 aaPredicted RBP10.61□□□□□ -0.71
CLCN6-208ENST00000494028 CDKN3Q16667 212 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 ZRANB3Q5FWF4 1079 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 DGKKQ5KSL6 1271 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 ISCA2Q86U28 154 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 TMEM25Q86YD3 366 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 SLC22A9Q8IVM8 553 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 TEX9Q8N6V9 391 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 CCNYL1Q8N7R7 359 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 FBXO27Q8NI29 283 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 CD200R1Q8TD46 325 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 EXT2Q93063 718 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 ZNF707Q96C28 371 aaPredicted RBP10.61□□□□□ -0.71
CLCN6-208ENST00000494028 ECHDC3Q96DC8 303 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 CCDC97Q96F63 343 aaPredicted RBP10.61□□□□□ -0.71
CLCN6-208ENST00000494028 BIRC8Q96P09 236 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 SLC30A3Q99726 388 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 C19orf43Q9BQ61 176 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 BTBD10Q9BSF8 475 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 OSBPL1AQ9BXW6 950 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 GPR63Q9BZJ6 419 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 SHCBP1LQ9BZQ2 653 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 CEP44Q9C0F1 390 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 P2RY12Q9H244 342 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 MTIF3Q9H2K0 278 aaKnown RBP10.61□□□□□ -0.71
CLCN6-208ENST00000494028 ATP13A3Q9H7F0 1226 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 MAGEE1Q9HCI5 957 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 BPIFA1Q9NP55 256 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 TNFRSF12AQ9NP84 129 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 TCF7L2Q9NQB0 619 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 MARK1Q9P0L2 795 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 BAIAP2L1Q9UHR4 511 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 ZDHHC2Q9UIJ5 367 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 PLA2G4CQ9UP65 541 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 VPS9D1Q9Y2B5 631 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.61□□□□□ -0.71
CLCN6-208ENST00000494028 DENND4AQ7Z401 1863 aa10.61□□□□□ -0.71
CLCN6-208ENST00000494028 TCF20Q9UGU0 1960 aaKnown RBP10.6□□□□□ -0.71
CLCN6-208ENST00000494028 NPEPPSL1A6NEC2 478 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms