RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 ADAM32Q8TC27 787 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 AGR3Q8TD06 166 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 HTRA1Q92743 480 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 ELMO3Q96BJ8 720 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 ZNF577Q9BSK1 485 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 GIMAP4Q9NUV9 329 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 PAK1IP1Q9NWT1 392 aaPredicted RBP7.06□□□□□ -1.28
EPHA3-203ENST00000494014 BBIP1A8MTZ0 92 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 ZW10O43264 779 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 TSPAN9O75954 239 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 KCNK2O95069 426 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 MFN2O95140 757 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 LYPLA2O95372 231 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 C4BPAP04003 597 aaKnown RBP7.06□□□□□ -1.28
EPHA3-203ENST00000494014 CHRNGP07510 517 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 SNRPB2P08579 225 aaKnown RBP7.06□□□□□ -1.28
EPHA3-203ENST00000494014 UMPSP11172 480 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 VASPP50552 380 aaPredicted RBP7.06□□□□□ -1.28
EPHA3-203ENST00000494014 GALK2Q01415 458 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 POU6F1Q14863 301 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 SMU1Q2TAY7 513 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 ZFP69Q49AA0 526 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 PPM1JQ5JR12 505 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 ZYG11AQ6WRX3 759 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 CLEC14AQ86T13 490 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 HORMAD1Q86X24 394 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 SNX29P2Q8IUI4 249 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 TBC1D21Q8IYX1 336 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 LGI2Q8N0V4 545 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 MPP5Q8N3R9 675 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 OR13J1Q8NGT2 312 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 FIG4Q92562 907 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 CEP170P1Q96L14 293 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 MARK4Q96L34 752 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 UBXN10Q96LJ8 280 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 RDH12Q96NR8 316 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 VPS35Q96QK1 796 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 RHOBTB2Q9BYZ6 727 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 MKRN2Q9H000 416 aaKnown RBP7.06□□□□□ -1.28
EPHA3-203ENST00000494014 NMRAL1Q9HBL8 299 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 PRDM5Q9NQX1 630 aaPredicted RBP7.06□□□□□ -1.28
EPHA3-203ENST00000494014 POLE4Q9NR33 117 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 DDX28Q9NUL7 540 aaKnown RBP7.06□□□□□ -1.28
EPHA3-203ENST00000494014 ACTR3BQ9P1U1 418 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 ARHGAP28Q9P2N2 729 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 ZNF639Q9UID6 485 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 GPSM3Q9Y4H4 160 aa7.06□□□□□ -1.28
EPHA3-203ENST00000494014 CENPFP49454 3210 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 TEX51A0A1B0GUA7 166 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 SNTNA6NMZ2 147 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 AP3B1O00203 1094 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 NRP2O60462 931 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 B4GALT4O60513 344 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 NDUFS2O75306 463 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 NDST3O95803 873 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 TRUB2O95900 331 aaKnown RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 HSD17B1P14061 328 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 RBL1P28749 1068 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 DEFA1P59665 94 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 DEFA3P59666 94 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 EPS8Q12929 822 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 SLC13A2Q13183 592 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 FASTKQ14296 549 aaKnown RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 PLCL1Q15111 1095 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 ARL13AQ5H913 290 aaPredicted RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 NPNTQ6UXI9 565 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 CATSPER4Q7RTX7 472 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 CMTR2Q8IYT2 770 aaKnown RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 CLYBLQ8N0X4 340 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 ARFGAP1Q8N6T3 406 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 TMEM161BQ8NDZ6 487 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 OR6F1Q8NGZ6 308 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 PSMA8Q8TAA3 256 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 MAGEE2Q8TD90 523 aaPredicted RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 ZNF516Q92618 1163 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 HDAC10Q969S8 669 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 TSNARE1Q96NA8 513 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 SAMD11Q96NU1 681 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 HOPXQ9BPY8 73 aaPredicted RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 KATNAL1Q9BW62 490 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 DSN1Q9H410 356 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 TM9SF3Q9HD45 589 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 SFMBT1Q9UHJ3 866 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 MTF2Q9Y483 593 aaPredicted RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 TTC24A2A3L6 582 aaPredicted RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 CCDC78A2IDD5 438 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 PDZK1P1A8MUH7 402 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 ZNF99A8MXY4 864 aaPredicted RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 TOR1BO14657 336 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 CCNE2O96020 404 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 LDLRP01130 860 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 APOA1P02647 267 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 KRT19P08727 400 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 TGFB3P10600 412 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 TNNI1P19237 187 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 DNAJB1P25685 340 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 ELK4P28324 431 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 LRPAP1P30533 357 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms