RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 CFAP99D6REC4 459 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 H7C0S8 307 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 SPINT1O43278 529 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 AVILO75366 819 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 PRAMEF1O95521 474 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 RALBP11234 206 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 KELP23276 732 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 HTR1BP28222 390 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 MAT2AP31153 395 aaKnown RBP14.87□□□□□ -0.03
ACTB-213ENST00000493945 STX2P32856 288 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 HOXD12P35452 270 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 ETV3P41162 512 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 ELK3P41970 407 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 GPR1P46091 355 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 DHPSP49366 369 aaPredicted RBP14.87□□□□□ -0.03
ACTB-213ENST00000493945 PPP2CBP62714 309 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 PPP2CAP67775 309 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 OVGP1Q12889 678 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 MTM1Q13496 603 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 SIM2Q14190 667 aaPredicted RBP14.87□□□□□ -0.03
ACTB-213ENST00000493945 STAT4Q14765 748 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 TEAD4Q15561 434 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 CDKN3Q16667 212 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 LONRF1Q17RB8 773 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 GPR33Q49SQ1 333 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 FASTKD1Q53R41 847 aaKnown RBP14.87□□□□□ -0.03
ACTB-213ENST00000493945 LYPLAL1Q5VWZ2 237 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 SEL1L3Q68CR1 1132 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 PMS2CLQ68D20 193 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 MRNIPQ6NTE8 343 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 ESRP1Q6NXG1 681 aaKnown RBP14.87□□□□□ -0.03
ACTB-213ENST00000493945 EMBQ6PCB8 327 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 Q6ZVL8 140 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 HSD11B1LQ7Z5J1 315 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 RELL1Q8IUW5 271 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 PHYKPLQ8IUZ5 450 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 MPP5Q8N3R9 675 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 OR6P1Q8NGX9 317 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 GSDMBQ8TAX9 411 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 SIGLEC10Q96LC7 697 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 FAM167BQ9BTA0 163 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 C6orf106Q9H6K1 298 aaPredicted RBP14.87□□□□□ -0.03
ACTB-213ENST00000493945 PHPT1Q9NRX4 125 aaPredicted RBP14.87□□□□□ -0.03
ACTB-213ENST00000493945 NSMCE4AQ9NXX6 385 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.87□□□□□ -0.03
ACTB-213ENST00000493945 CRLS1Q9UJA2 301 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 V9GYY5 206 aaPredicted RBP14.87□□□□□ -0.03
ACTB-213ENST00000493945 CUL9Q8IWT3 2517 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 A6NNZ2 444 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 CACNB4O00305 520 aaPredicted RBP14.86□□□□□ -0.03
ACTB-213ENST00000493945 SLC31A1O15431 190 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 MAGEA4P43358 317 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 CRADDP78560 199 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 SEMG2Q02383 582 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 CACNG1Q06432 222 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 DMWDQ09019 674 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 PTK2BQ14289 1009 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 FNBP1LQ5T0N5 605 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 RNF187Q5TA31 235 aaPredicted RBP14.86□□□□□ -0.03
ACTB-213ENST00000493945 ALS2CLQ60I27 953 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 ZNF449Q6P9G9 518 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 CERS6Q6ZMG9 384 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 PRR23BQ6ZRT6 265 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 TRMT10CQ7L0Y3 403 aaKnown RBP14.86□□□□□ -0.03
ACTB-213ENST00000493945 SNX20Q7Z614 316 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 TECPR1Q7Z6L1 1165 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 SDCCAG8Q86SQ7 713 aaPredicted RBP14.86□□□□□ -0.03
ACTB-213ENST00000493945 TMEM135Q86UB9 458 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 DCP2Q8IU60 420 aaKnown RBP14.86□□□□□ -0.03
ACTB-213ENST00000493945 FAM160A2Q8N612 972 aaPredicted RBP14.86□□□□□ -0.03
ACTB-213ENST00000493945 BIRC7Q96CA5 298 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 CFAP36Q96G28 342 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 SERAC1Q96JX3 654 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 DNAJC1Q96KC8 554 aaKnown RBP14.86□□□□□ -0.03
ACTB-213ENST00000493945 HINFPQ9BQA5 517 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 SEMA4AQ9H3S1 761 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 WDR26Q9H7D7 661 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 BPIFA1Q9NP55 256 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 CD93Q9NPY3 652 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 CHRAC1Q9NRG0 131 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 AASDHPPTQ9NRN7 309 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 TXNDC16Q9P2K2 825 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 INVSQ9Y283 1065 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 FNDC3AQ9Y2H6 1198 aaKnown RBP14.86□□□□□ -0.03
ACTB-213ENST00000493945 HCN4Q9Y3Q4 1203 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 HS3ST3A1Q9Y663 406 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 TEX264Q9Y6I9 313 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 FAM169AQ9Y6X4 670 aa14.86□□□□□ -0.03
ACTB-213ENST00000493945 FANCMQ8IYD8 2048 aa14.85□□□□□ -0.03
ACTB-213ENST00000493945 AURKAO14965 403 aa14.85□□□□□ -0.03
ACTB-213ENST00000493945 SRP72O76094 671 aaKnown RBP14.85□□□□□ -0.03
ACTB-213ENST00000493945 PAK4O96013 591 aaPredicted RBP14.85□□□□□ -0.03
ACTB-213ENST00000493945 PCCBP05166 539 aa14.85□□□□□ -0.03
ACTB-213ENST00000493945 BPIP17213 487 aa14.85□□□□□ -0.03
ACTB-213ENST00000493945 PMLP29590 882 aa14.85□□□□□ -0.03
ACTB-213ENST00000493945 MC4RP32245 332 aa14.85□□□□□ -0.03
ACTB-213ENST00000493945 RABIFP47224 123 aa14.85□□□□□ -0.03
ACTB-213ENST00000493945 TTPAP49638 278 aa14.85□□□□□ -0.03
ACTB-213ENST00000493945 THOP1P52888 689 aa14.85□□□□□ -0.03
ACTB-213ENST00000493945 YPEL5P62699 121 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms