RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 GPR22Q99680 433 aa12.63□□□□□ -0.39
VPS52-220ENST00000493674 CENPHQ9H3R5 247 aa12.63□□□□□ -0.39
VPS52-220ENST00000493674 SSU72Q9NP77 194 aaKnown RBP12.63□□□□□ -0.39
VPS52-220ENST00000493674 ARHGEF3Q9NR81 526 aa12.63□□□□□ -0.39
VPS52-220ENST00000493674 CATSPERZQ9NTU4 200 aa12.63□□□□□ -0.39
VPS52-220ENST00000493674 WNT16Q9UBV4 365 aa12.63□□□□□ -0.39
VPS52-220ENST00000493674 PKP3Q9Y446 797 aa12.63□□□□□ -0.39
VPS52-220ENST00000493674 IKBKGQ9Y6K9 419 aa12.63□□□□□ -0.39
VPS52-220ENST00000493674 KMT2EQ8IZD2 1858 aa12.63□□□□□ -0.39
VPS52-220ENST00000493674 RGSL1A5PLK6 1076 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 FOXO6A8MYZ6 492 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 TRIM49D1C9J1S8 452 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 AP1G1O43747 822 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 RFPL1O75677 317 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 S1PR4O95977 384 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 IL1BP01584 269 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 AHSGP02765 367 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 CHRNB1P11230 501 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 HOXB2P14652 356 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 C5AR1P21730 350 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 MC4RP32245 332 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 SPRP35270 261 aaPredicted RBP12.62□□□□□ -0.39
VPS52-220ENST00000493674 P2RY2P41231 377 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 SPINT3P49223 89 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 NEK3P51956 506 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 STARD6P59095 220 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 TMPRSS15P98073 1019 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 SEMG2Q02383 582 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 SLC18A2Q05940 514 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 ELP6Q0PNE2 266 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 CNTN1Q12860 1018 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 ILF2Q12905 390 aaKnown RBP12.62□□□□□ -0.39
VPS52-220ENST00000493674 CTBP1Q13363 440 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 STARD3Q14849 445 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 TMEM52BQ4KMG9 183 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 AGBL4Q5VU57 503 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 ZDHHC20Q5W0Z9 365 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 ZNF776Q68DI1 518 aaPredicted RBP12.62□□□□□ -0.39
VPS52-220ENST00000493674 LIPIQ6XZB0 460 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 PTAR1Q7Z6K3 402 aaPredicted RBP12.62□□□□□ -0.39
VPS52-220ENST00000493674 TECPR1Q7Z6L1 1165 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 SYNPOQ8N3V7 929 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 PAF1Q8N7H5 531 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 OR6P1Q8NGX9 317 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 GABPB2Q8TAK5 448 aaPredicted RBP12.62□□□□□ -0.39
VPS52-220ENST00000493674 PBXIP1Q96AQ6 731 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 VPS39Q96JC1 886 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 TCF12Q99081 682 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 BPIFA1Q9NP55 256 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 IL26Q9NPH9 171 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 MKS1Q9NXB0 559 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 MUTYHQ9UIF7 546 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 MMP17Q9ULZ9 603 aa12.62□□□□□ -0.39
VPS52-220ENST00000493674 A0A1W2PPM1 405 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 KRBA1A5PL33 1030 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 CHURC1-FNTBB4DL54 471 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 PLK4O00444 970 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 MID1O15344 667 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 SYNCRIPO60506 623 aaKnown RBP12.61□□□□□ -0.39
VPS52-220ENST00000493674 SLC4A1P02730 911 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 ALDOAP04075 364 aaKnown RBP12.61□□□□□ -0.39
VPS52-220ENST00000493674 F7P08709 466 aaPredicted RBP12.61□□□□□ -0.39
VPS52-220ENST00000493674 CREB1P16220 341 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 NR1D1P20393 614 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 SPAM1P38567 509 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 CD151P48509 253 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 POLD2P49005 469 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 TAS2R38P59533 333 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 CACNG1Q06432 222 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 FZD5Q13467 585 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 BMPR2Q13873 1038 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 POM121L1PQ3SYA9 428 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 ZNF789Q5FWF6 425 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 EOGTQ5NDL2 527 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 LGSNQ5TDP6 509 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 SDE2Q6IQ49 451 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 MRNIPQ6NTE8 343 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 PSAPL1Q6NUJ1 521 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 ERAP2Q6P179 960 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 ZNF852Q6ZMS4 543 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 KDM7AQ6ZMT4 941 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 CYP2U1Q7Z449 544 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 HSD11B1LQ7Z5J1 315 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 TTC7BQ86TV6 843 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 PIANPQ8IYJ0 282 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 GPR26Q8NDV2 337 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 RPLP0P6Q8NHW5 317 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 SERAC1Q96JX3 654 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 COQ10AQ96MF6 247 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 C1QTNF1Q9BXJ1 281 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 MKRN2Q9H000 416 aaKnown RBP12.61□□□□□ -0.39
VPS52-220ENST00000493674 CDH19Q9H159 772 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 INTS10Q9NVR2 710 aaKnown RBP12.61□□□□□ -0.39
VPS52-220ENST00000493674 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.61□□□□□ -0.39
VPS52-220ENST00000493674 BCCIPQ9P287 314 aaKnown RBP eCLIP12.61□□□□□ -0.39
VPS52-220ENST00000493674 APPL1Q9UKG1 709 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 CORO1CQ9ULV4 474 aaPredicted RBP12.61□□□□□ -0.39
VPS52-220ENST00000493674 ITM2BQ9Y287 266 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 ZNF318Q5VUA4 2279 aa12.61□□□□□ -0.39
VPS52-220ENST00000493674 TNRC6BQ9UPQ9 1833 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms