RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	MAX	P61244	160 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	DPYS	Q14117	519 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	SNAP47	Q5SQN1	464 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	FKBP15	Q5T1M5	1219 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	DCAF12	Q5T6F0	453 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	ATP1A1-AS1	Q5TC04	95 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	TMCO4	Q5TGY1	634 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	TMEM71	Q6P5X7	295 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	TECPR1	Q7Z6L1	1165 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	CCDC112	Q8NEF3	446 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	ENOX1	Q8TC92	643 aa	Known RBP	13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	RTP4	Q96DX8	246 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	SCARF2	Q96GP6	870 aa	Predicted RBP	13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	SLC45A3	Q96JT2	553 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	AGAP2	Q99490	1192 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	APMAP	Q9HDC9	416 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	ETNK2	Q9NVF9	386 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	FANCL	Q9NW38	375 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	DONSON	Q9NYP3	566 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	PDP2	Q9P2J9	529 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	TUBD1	Q9UJT1	453 aa		13.64	□□□□□ -0.23
SAMM50-204	ENST00000493161	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	ZW10	O43264	779 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	OAS2	P29728	719 aa	Known RBP	13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	MIP	P30301	263 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	RENBP	P51606	427 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	COPB1	P53618	953 aa	Known RBP	13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	PYCR3	Q53H96	274 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	NEK11	Q8NG66	645 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	SLC37A2	Q8TED4	501 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	SCAMP4	Q969E2	229 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	ABHD17A	Q96GS6	310 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	OR2M4	Q96R27	311 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	NUDCD1	Q96RS6	583 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	SYT11	Q9BT88	431 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	ASPSCR1	Q9BZE9	553 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	NUP62CL	Q9H1M0	184 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	ABCG8	Q9H221	673 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	PLAA	Q9Y263	795 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	PRKAB1	Q9Y478	270 aa		13.63	□□□□□ -0.23
SAMM50-204	ENST00000493161	SOCS5	O75159	536 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	MAP3K6	O95382	1288 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	PDHA1	P08559	390 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	GP1BB	P13224	206 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	AMPD1	P23109	780 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	TEAD1	P28347	426 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	GPR1	P46091	355 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	MC2R	Q01718	297 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	CDC20	Q12834	499 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	ZNF235	Q14590	738 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	DEFB109B	Q30KR1	87 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	PLEKHA7	Q6IQ23	1121 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	ARHGAP22	Q7Z5H3	698 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	NLGN4X	Q8N0W4	816 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	PIH1D2	Q8WWB5	315 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	SCRN2	Q96FV2	425 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	ZNF599	Q96NL3	588 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	CATSPER2	Q96P56	530 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	MGME1	Q9BQP7	344 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	ZMYND15	Q9H091	742 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	ANAPC2	Q9UJX6	822 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	PHTF1	Q9UMS5	762 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	MAN2B2	Q9Y2E5	1009 aa		13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	MRPS18B	Q9Y676	258 aa	Known RBP	13.62	□□□□□ -0.23
SAMM50-204	ENST00000493161	UTP20	O75691	2785 aa	Known RBP	13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	TMEM191C	A6NGB0	347 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	EIF3CL	B5ME19	914 aa	Known RBP	13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161		K7EM74	188 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	MAFK	O60675	156 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	PGLS	O95336	258 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	CYP2A6	P11509	494 aa	Predicted RBP	13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	TCF4	P15884	667 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	NR1D1	P20393	614 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	MAP4	P27816	1152 aa	Known RBP	13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	IL1R2	P27930	398 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	FASLG	P48023	281 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	HCAR3	P49019	387 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	PPM1F	P49593	454 aa	Predicted RBP	13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	RAB15	P59190	212 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	GPLD1	P80108	840 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	PTS	Q03393	145 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	DPT	Q07507	201 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	NFATC2	Q13469	925 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	IHH	Q14623	411 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	ADAMTSL4	Q6UY14	1074 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	IRF2BP2	Q7Z5L9	587 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	SFRP1	Q8N474	314 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	AP2M1	Q96CW1	435 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	AHCYL2	Q96HN2	611 aa	Known RBP	13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	EIF3C	Q99613	913 aa	Known RBP	13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	SLC38A3	Q99624	504 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	DPYSL5	Q9BPU6	564 aa		13.61	□□□□□ -0.23
SAMM50-204	ENST00000493161	PARVA	Q9NVD7	372 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms