RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 TPP2P29144 1249 aaPredicted RBP13.61□□□□□ -0.23
TRIM11-204ENST00000493030 CLCNKBP51801 687 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 CHN2P52757 468 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 KCNJ2P63252 427 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 RNASEH2BQ5TBB1 312 aaKnown RBP13.61□□□□□ -0.23
TRIM11-204ENST00000493030 CAPN13Q6MZZ7 669 aaPredicted RBP13.61□□□□□ -0.23
TRIM11-204ENST00000493030 RHOJQ9H4E5 214 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 RAI2Q9Y5P3 530 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 IQCF5A8MTL0 148 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 E9PAM4 449 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 CILPO75339 1184 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 RNASEH2AO75792 299 aaKnown RBP13.61□□□□□ -0.23
TRIM11-204ENST00000493030 EPHX1P07099 455 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 CYP4B1P13584 511 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 MMP8P22894 467 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 SPIRE1Q08AE8 756 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 NOMO1Q15155 1222 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 KLHL24Q6TFL4 600 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 KCTD15Q96SI1 283 aaPredicted RBP13.61□□□□□ -0.23
TRIM11-204ENST00000493030 NMUR1Q9HB89 426 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 RPP40O75818 363 aaKnown RBP13.61□□□□□ -0.23
TRIM11-204ENST00000493030 TOP3BO95985 862 aaKnown RBP13.61□□□□□ -0.23
TRIM11-204ENST00000493030 NUDT17P0C025 328 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 BNIP2Q12982 314 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 TAB1Q15750 504 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 PARP15Q460N3 678 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 BROXQ5VW32 411 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 PEG10Q86TG7 708 aaKnown RBP13.61□□□□□ -0.23
TRIM11-204ENST00000493030 CPA6Q8N4T0 437 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 TEX47Q8TBZ9 253 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 MYDGFQ969H8 173 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 LENG1Q96BZ8 264 aaPredicted RBP13.61□□□□□ -0.23
TRIM11-204ENST00000493030 ZNF354BQ96LW1 612 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 NPAS2Q99743 824 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 LRMDAQ9H2I8 198 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 TNKS2Q9H2K2 1166 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 HMG20AQ9NP66 347 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 GPN3Q9UHW5 284 aaPredicted RBP13.61□□□□□ -0.23
TRIM11-204ENST00000493030 MRPS33Q9Y291 106 aaKnown RBP13.61□□□□□ -0.23
TRIM11-204ENST00000493030 MAP2K7O14733 419 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 SUV39H1O43463 412 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 SMARCB1Q12824 385 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 C9orf64Q5T6V5 341 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 ABRAXAS1Q6UWZ7 409 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 AGAP11Q8TF27 550 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 EEF1AKMT1Q8WVE0 214 aa13.61□□□□□ -0.23
TRIM11-204ENST00000493030 DHRS12A0PJE2 317 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 TMEM88BA6NKF7 163 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 H3BM21 787 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 PRMT5O14744 637 aaPredicted RBP13.6□□□□□ -0.23
TRIM11-204ENST00000493030 DBTP11182 482 aaKnown RBP13.6□□□□□ -0.23
TRIM11-204ENST00000493030 AQP1P29972 269 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 SLC7A2P52569 658 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 PSMD4P55036 377 aaKnown RBP13.6□□□□□ -0.23
TRIM11-204ENST00000493030 TAS2R41P59536 307 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 GBE1Q04446 702 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 ITGADQ13349 1161 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 HECTD2Q5U5R9 776 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 CHST9Q7L1S5 443 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 GPR135Q8IZ08 494 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 DEPDC4Q8N2C3 294 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 BEND7Q8N7W2 519 aaPredicted RBP13.6□□□□□ -0.23
TRIM11-204ENST00000493030 TSPAN14Q8NG11 270 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 CD99L2Q8TCZ2 262 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 TRIM63Q969Q1 353 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 PHPT1Q9NRX4 125 aaPredicted RBP13.6□□□□□ -0.23
TRIM11-204ENST00000493030 ZNF490Q9ULM2 529 aaPredicted RBP13.6□□□□□ -0.23
TRIM11-204ENST00000493030 CLUHO75153 1309 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 ADSSP30520 456 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 GRM3Q14832 879 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 ANKRD23Q86SG2 305 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 APOLD1Q96LR9 279 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 QKIQ96PU8 341 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRIM11-204ENST00000493030 PDZD7Q9H5P4 517 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 CD84Q9UIB8 345 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 TEX28O15482 410 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 FAM155BO75949 473 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 TRBC1P01850 177 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 PTDSS1P48651 473 aaKnown RBP13.6□□□□□ -0.23
TRIM11-204ENST00000493030 HNMTP50135 292 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 TCEAL5Q5H9L2 206 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 DHDDSQ86SQ9 333 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 LDB1Q86U70 411 aaPredicted RBP13.6□□□□□ -0.23
TRIM11-204ENST00000493030 C12orf56Q8IXR9 622 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 PNPT1Q8TCS8 783 aaKnown RBP13.6□□□□□ -0.23
TRIM11-204ENST00000493030 TIFAQ96CG3 184 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 PSMD11O00231 422 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 FFAR2O15552 330 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 GMFGO60234 142 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 ECDO95905 644 aaPredicted RBP13.6□□□□□ -0.23
TRIM11-204ENST00000493030 TACR2P21452 398 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 RAPSNQ13702 412 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 CPTPQ5TA50 214 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 POMZP3Q6PJE2 187 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 MREGQ8N565 214 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 UPF1Q92900 1129 aaKnown RBP eCLIP13.6□□□□□ -0.237e-7■■■■□ 25.3
TRIM11-204ENST00000493030 SLC47A1Q96FL8 570 aa13.6□□□□□ -0.23
TRIM11-204ENST00000493030 OXCT2Q9BYC2 517 aaPredicted RBP13.6□□□□□ -0.23
TRIM11-204ENST00000493030 WDR55Q9H6Y2 383 aaPredicted RBP13.6□□□□□ -0.23
TRIM11-204ENST00000493030 ERVK-5Q9HDB9 667 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms