RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 PEX11BO96011 259 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 MAP4P27816 1152 aaKnown RBP13.17□□□□□ -0.3
USF1-206ENST00000491629 VIPR1P32241 457 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 ACTR1BP42025 376 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 UQCRFS1P47985 274 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 FASLGP48023 281 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 RAB15P59190 212 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 TPI1P60174 286 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 ACTR1AP61163 376 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 POLR2FP61218 127 aaKnown RBP13.17□□□□□ -0.3
USF1-206ENST00000491629 POLR2LP62875 67 aaKnown RBP13.17□□□□□ -0.3
USF1-206ENST00000491629 SLC10A7Q0GE19 358 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 TPD52L1Q16890 204 aaPredicted RBP13.17□□□□□ -0.3
USF1-206ENST00000491629 LACTB2Q53H82 288 aaPredicted RBP13.17□□□□□ -0.3
USF1-206ENST00000491629 SNAP47Q5SQN1 464 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 DOK6Q6PKX4 331 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 TECPR1Q7Z6L1 1165 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 TRIM74Q86UV6 250 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 FAM114A1Q8IWE2 563 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 CCDC112Q8NEF3 446 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 SLC37A2Q8TED4 501 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 APOBEC4Q8WW27 367 aaKnown RBP13.17□□□□□ -0.3
USF1-206ENST00000491629 STARD8Q92502 1023 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 PSKH2Q96QS6 385 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 KCTD15Q96SI1 283 aaPredicted RBP13.17□□□□□ -0.3
USF1-206ENST00000491629 CNPY3Q9BT09 278 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 CINPQ9BW66 212 aaPredicted RBP13.17□□□□□ -0.3
USF1-206ENST00000491629 NLRC4Q9NPP4 1024 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 TMEM98Q9Y2Y6 226 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 KCNMB2Q9Y691 235 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 DOPEY1Q5JWR5 2465 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 ABCA12Q86UK0 2595 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 PES1O00541 588 aaKnown RBP13.16□□□□□ -0.3
USF1-206ENST00000491629 STK17BO94768 372 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 RNF224P0DH78 156 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 ERCC2P18074 760 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 TEAD1P28347 426 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 NSFP46459 744 aaKnown RBP13.16□□□□□ -0.3
USF1-206ENST00000491629 AIF1P55008 147 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 AP1S1P61966 158 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 GPLD1P80108 840 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 IL10RBQ08334 325 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 ABHD18Q0P651 414 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 TRAF2Q12933 501 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 PYCR3Q53H96 274 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 TCP11X2Q5H9J9 407 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 TRIM72Q6ZMU5 477 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 SFRP1Q8N474 314 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 TEFMQ96QE5 360 aaKnown RBP13.16□□□□□ -0.3
USF1-206ENST00000491629 AGAP2Q99490 1192 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 DPYSL5Q9BPU6 564 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 FBXO8Q9NRD0 319 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 TAB2Q9NYJ8 693 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 CD84Q9UIB8 345 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 AP4E1Q9UPM8 1137 aa13.16□□□□□ -0.3
USF1-206ENST00000491629 DFFAO00273 331 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 EEF2KO00418 725 aaKnown RBP13.15□□□□□ -0.3
USF1-206ENST00000491629 ZW10O43264 779 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 MAP3K6O95382 1288 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 PDGFAP04085 211 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 CALB1P05937 261 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 KRT7P08729 469 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 ZNF28P17035 718 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 HTR7P34969 479 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 STAT5AP42229 794 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 DPTQ07507 201 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 KLRB1Q12918 225 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 IHHQ14623 411 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 CRTC2Q53ET0 693 aaPredicted RBP13.15□□□□□ -0.3
USF1-206ENST00000491629 RAET1GQ6H3X3 334 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 C16orf46Q6P387 395 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 DNAJC24Q6P3W2 148 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 WDR74Q6RFH5 385 aaPredicted RBP13.15□□□□□ -0.3
USF1-206ENST00000491629 CEACAM20Q6UY09 585 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 SCAMP4Q969E2 229 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 MCCC1Q96RQ3 725 aaPredicted RBP13.15□□□□□ -0.3
USF1-206ENST00000491629 SNRNP25Q9BV90 132 aaKnown RBP13.15□□□□□ -0.3
USF1-206ENST00000491629 ABCG8Q9H221 673 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 NOD2Q9HC29 1040 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 FAM207AQ9NSI2 230 aaPredicted RBP13.15□□□□□ -0.3
USF1-206ENST00000491629 SIDT1Q9NXL6 827 aaKnown RBP13.15□□□□□ -0.3
USF1-206ENST00000491629 SIK3Q9Y2K2 1263 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 SPTBP11277 2137 aa13.15□□□□□ -0.3
USF1-206ENST00000491629 CPP00450 1065 aa13.14□□□□□ -0.31
USF1-206ENST00000491629 TCN2P20062 427 aa13.14□□□□□ -0.31
USF1-206ENST00000491629 ERCC5P28715 1186 aaPredicted RBP13.14□□□□□ -0.31
USF1-206ENST00000491629 BIRC2Q13490 618 aa13.14□□□□□ -0.31
USF1-206ENST00000491629 RFTN1Q14699 578 aaPredicted RBP13.14□□□□□ -0.31
USF1-206ENST00000491629 LBRQ14739 615 aaKnown RBP13.14□□□□□ -0.31
USF1-206ENST00000491629 ADAMTSL4Q6UY14 1074 aa13.14□□□□□ -0.31
USF1-206ENST00000491629 RFX8Q6ZV50 586 aa13.14□□□□□ -0.31
USF1-206ENST00000491629 MARK2Q7KZI7 788 aaKnown RBP13.14□□□□□ -0.31
USF1-206ENST00000491629 TMEM135Q86UB9 458 aa13.14□□□□□ -0.31
USF1-206ENST00000491629 PDCD6IPQ8WUM4 868 aaKnown RBP13.14□□□□□ -0.31
USF1-206ENST00000491629 KIAA1143Q96AT1 154 aaPredicted RBP13.14□□□□□ -0.31
USF1-206ENST00000491629 COX14Q96I36 57 aa13.14□□□□□ -0.31
USF1-206ENST00000491629 OR2M4Q96R27 311 aa13.14□□□□□ -0.31
USF1-206ENST00000491629 TRIM7Q9C029 511 aa13.14□□□□□ -0.31
USF1-206ENST00000491629 DHX35Q9H5Z1 703 aaKnown RBP13.14□□□□□ -0.31
USF1-206ENST00000491629 SP110Q9HB58 689 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms