RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 NAT6Q93015 286 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 TBATAQ96M53 351 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 ZNF599Q96NL3 588 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 RIOK2Q9BVS4 552 aaKnown RBP8.88□□□□□ -0.99
HDAC3-211ENST00000491581 USP29Q9HBJ7 922 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 THSD1Q9NS62 852 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 RBM22Q9NW64 420 aaKnown RBP eCLIP8.88□□□□□ -0.991e-7■■■■■ 41.1
HDAC3-211ENST00000491581 CTTNBP2NLQ9P2B4 639 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 SAE1Q9UBE0 346 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-211ENST00000491581 IP6K2Q9UHH9 426 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 LOXL2Q9Y4K0 774 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 PTPRQQ9UMZ3 2332 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 UNC13CQ8NB66 2214 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 A0A0J9YYE9 177 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-211ENST00000491581 C3orf70A6NLC5 250 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-211ENST00000491581 EIF4E1BA6NMX2 242 aaKnown RBP8.87□□□□□ -0.99
HDAC3-211ENST00000491581 EIF3CLB5ME19 914 aaKnown RBP8.87□□□□□ -0.99
HDAC3-211ENST00000491581 MYO1FO00160 1098 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 GPR39O43194 453 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 SOCS5O75159 536 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 PROSCO94903 275 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 JCHAINP01591 159 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 TRBC1P01850 177 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 DESP17661 470 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 CD86P42081 329 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 GPR1P46091 355 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 BLKP51451 505 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 SUOXP51687 545 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 TMPRSS3P57727 454 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 ERVPABLB-1P60509 514 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 DYNLT1P63172 113 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 ADCY2Q08462 1091 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 PAFAH1B3Q15102 231 aaKnown RBP8.87□□□□□ -0.99
HDAC3-211ENST00000491581 PLA2G4EQ3MJ16 856 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 ALS2CLQ60I27 953 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 CLEC14AQ86T13 490 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 SLITRK4Q8IW52 837 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 LZTR1Q8N653 840 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 KCTD6Q8NC69 237 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 SPATA22Q8NHS9 363 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 MAML1Q92585 1016 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 GLMNQ92990 594 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 USP7Q93009 1102 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 RNF25Q96BH1 459 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-211ENST00000491581 AP2M1Q96CW1 435 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 TRIM11Q96F44 468 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 SCRN2Q96FV2 425 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 MCCC1Q96RQ3 725 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-211ENST00000491581 EIF3CQ99613 913 aaKnown RBP8.87□□□□□ -0.99
HDAC3-211ENST00000491581 TDRD1Q9BXT4 1180 aaKnown RBP8.87□□□□□ -0.99
HDAC3-211ENST00000491581 C10orf88Q9H8K7 445 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 UBP1Q9NZI7 540 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 CNOT6Q9ULM6 557 aaKnown RBP8.87□□□□□ -0.99
HDAC3-211ENST00000491581 PHTF1Q9UMS5 762 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 LUC7L2Q9Y383 392 aaKnown RBP8.87□□□□□ -0.99
HDAC3-211ENST00000491581 PCDHGA8Q9Y5G5 932 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 HEY1Q9Y5J3 304 aa8.87□□□□□ -0.99
HDAC3-211ENST00000491581 IGHV5-10-1A0A0J9YXX1 117 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 CFAP69A5D8W1 941 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 CYSRT1A8MQ03 144 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 A8MU76 341 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 AURKAO14965 403 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 MTX2O75431 263 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 TCEA3O75764 348 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 ASMTLO95671 621 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 PLA2G2AP14555 144 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 GLB1P16278 677 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 KDELR1P24390 212 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 CD1CP29017 333 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 ACTR1BP42025 376 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 MARCKSL1P49006 195 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 RENBPP51606 427 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 STC1P52823 247 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 ACTR1AP61163 376 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 POLR2LP62875 67 aaKnown RBP8.86□□□□□ -0.99
HDAC3-211ENST00000491581 ZFP36L1Q07352 338 aaKnown RBP8.86□□□□□ -0.99
HDAC3-211ENST00000491581 VAC14Q08AM6 782 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 ARHGEF7Q14155 803 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 PCSK7Q16549 785 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 QPCTQ16769 361 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 LINC00303Q3SY05 128 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 MAP9Q49MG5 647 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 KHDC1Q4VXA5 237 aaKnown RBP8.86□□□□□ -0.99
HDAC3-211ENST00000491581 TAF1BQ53T94 588 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-211ENST00000491581 COLEC12Q5KU26 742 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 SNAP47Q5SQN1 464 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 ZFYVE27Q5T4F4 411 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 LVRNQ6Q4G3 990 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 CHST15Q7LFX5 561 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-211ENST00000491581 LYSMD3Q7Z3D4 306 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 C17orf82Q86X59 251 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-211ENST00000491581 PLD5Q8N7P1 536 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 EXD3Q8N9H8 876 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 CCNYQ8ND76 341 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 HTR3CQ8WXA8 447 aa8.86□□□□□ -0.99
HDAC3-211ENST00000491581 SCG3Q8WXD2 468 aaKnown RBP8.86□□□□□ -0.99
HDAC3-211ENST00000491581 SYN2Q92777 582 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-211ENST00000491581 LIN37Q96GY3 246 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-211ENST00000491581 CCDC74BQ96LY2 380 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms