RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 HEXIM1O94992 359 aaKnown RBP8.17□□□□□ -1.1
USP39-216ENST00000490193 DLGAP3O95886 979 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 MAN1A1P33908 653 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 ADCY8P40145 1251 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 STAT5AP42229 794 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 GNPDA1P46926 289 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 ZNF143P52747 638 aaPredicted RBP8.17□□□□□ -1.1
USP39-216ENST00000490193 CDK3Q00526 305 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 BIRC2Q13490 618 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 SEPT6Q14141 434 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 MAP7Q14244 749 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 ACOX1Q15067 660 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 CNGA3Q16281 694 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.17□□□□□ -1.1
USP39-216ENST00000490193 NKAIN2Q5VXU1 208 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 TCTN3Q6NUS6 607 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 SLC30A9Q6PML9 568 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 WDR74Q6RFH5 385 aaPredicted RBP8.17□□□□□ -1.1
USP39-216ENST00000490193 CEACAM20Q6UY09 585 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 TIPARPQ7Z3E1 657 aaKnown RBP8.17□□□□□ -1.1
USP39-216ENST00000490193 ATCAYQ86WG3 371 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 FAM129CQ86XR2 697 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 PHF13Q86YI8 300 aaPredicted RBP8.17□□□□□ -1.1
USP39-216ENST00000490193 SLC30A5Q8TAD4 765 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 STARD8Q92502 1023 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 DTD2Q96FN9 168 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 NSMCE3Q96MG7 304 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 PSKH2Q96QS6 385 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 EIF3CQ99613 913 aaKnown RBP8.17□□□□□ -1.1
USP39-216ENST00000490193 SELENOOQ9BVL4 669 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 SLC39A8Q9C0K1 460 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 GANQ9H2C0 597 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 LRRC4CQ9HCJ2 640 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 B4GALT6Q9UBX8 382 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 KCTD3Q9Y597 815 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 GTF3C3Q9Y5Q9 886 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.16□□□□□ -1.1
USP39-216ENST00000490193 MTSS1O43312 755 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 STK17BO94768 372 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 CALB1P05937 261 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 PRKAR1AP10644 381 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 TCN2P20062 427 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 MPSTP25325 297 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 NFKBIAP25963 317 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 VIPR1P32241 457 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 ACTR1BP42025 376 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 PAPOLAP51003 745 aaKnown RBP8.16□□□□□ -1.1
USP39-216ENST00000490193 JAM2P57087 298 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 TPI1P60174 286 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 ACTR1AP61163 376 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 DPTQ07507 201 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 IL10RBQ08334 325 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 LRP8Q14114 963 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 TPD52L1Q16890 204 aaPredicted RBP8.16□□□□□ -1.1
USP39-216ENST00000490193 DEFB109BQ30KR1 87 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 SCYL2Q6P3W7 929 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 BLOC1S3Q6QNY0 202 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 MON1BQ7L1V2 547 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 PHLDB2Q86SQ0 1253 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 ARHGAP12Q8IWW6 846 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 NRSN1Q8IZ57 195 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 SFRP1Q8N474 314 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 OR10G6Q8NH81 332 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 SLC37A2Q8TED4 501 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 OR2M4Q96R27 311 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 PCDHB18PQ96TA0 734 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 CNPY3Q9BT09 278 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 CINPQ9BW66 212 aaPredicted RBP8.16□□□□□ -1.1
USP39-216ENST00000490193 ADAM22Q9P0K1 906 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 PLEKHB1Q9UF11 243 aaPredicted RBP8.16□□□□□ -1.1
USP39-216ENST00000490193 TP53TG5Q9Y2B4 290 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 KCNMB2Q9Y691 235 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 CENPEQ02224 2701 aa8.16□□□□□ -1.1
USP39-216ENST00000490193 ANKRD17O75179 2603 aaKnown RBP8.16□□□□□ -1.1
USP39-216ENST00000490193 A8MX80 341 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 MKRN2OSH3BPM6 223 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 GADD45BO75293 160 aaPredicted RBP8.15□□□□□ -1.1
USP39-216ENST00000490193 KRT38O76015 456 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 GFPT2O94808 682 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 SOD1P00441 154 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 ANKRD34CP0C6C1 535 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 LHCGRP22888 699 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 SOX5P35711 763 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 ETV3P41162 512 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 NSFP46459 744 aaKnown RBP8.15□□□□□ -1.1
USP39-216ENST00000490193 RENBPP51606 427 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 EPHA4P54764 986 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 CLEC16AQ2KHT3 1053 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 PYCR3Q53H96 274 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 TMCO4Q5TGY1 634 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 ADAMTSL4Q6UY14 1074 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 HSD11B1LQ7Z5J1 315 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 TECPR1Q7Z6L1 1165 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 NLRP8Q86W28 1048 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 UNC5BQ8IZJ1 945 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 ESX1Q8N693 406 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 SCRN2Q96FV2 425 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 AHCYL2Q96HN2 611 aaKnown RBP8.15□□□□□ -1.1
USP39-216ENST00000490193 CELF6Q96J87 481 aaKnown RBP8.15□□□□□ -1.1
USP39-216ENST00000490193 ZNF599Q96NL3 588 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms