RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 SGF29Q96ES7 293 aa11.73□□□□□ -0.53
ACTN4-206ENST00000489451 SCARF2Q96GP6 870 aaPredicted RBP11.73□□□□□ -0.53
ACTN4-206ENST00000489451 AGAP2Q99490 1192 aa11.73□□□□□ -0.53
ACTN4-206ENST00000489451 FUCA2Q9BTY2 467 aa11.73□□□□□ -0.53
ACTN4-206ENST00000489451 ZWILCHQ9H900 591 aa11.73□□□□□ -0.53
ACTN4-206ENST00000489451 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.73□□□□□ -0.53
ACTN4-206ENST00000489451 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.73□□□□□ -0.53
ACTN4-206ENST00000489451 TMEM9Q9P0T7 183 aa11.73□□□□□ -0.53
ACTN4-206ENST00000489451 PHTF1Q9UMS5 762 aa11.73□□□□□ -0.53
ACTN4-206ENST00000489451 PCDHGA4Q9Y5G9 962 aa11.73□□□□□ -0.53
ACTN4-206ENST00000489451 IGHV5-10-1A0A0J9YXX1 117 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.72□□□□□ -0.53
ACTN4-206ENST00000489451 MFSD11O43934 449 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 EML2O95834 649 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 IVLP07476 585 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 FGF3P11487 239 aaPredicted RBP11.72□□□□□ -0.53
ACTN4-206ENST00000489451 DESP17661 470 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 TEAD1P28347 426 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 HSPA9P38646 679 aaKnown RBP11.72□□□□□ -0.53
ACTN4-206ENST00000489451 ADCY8P40145 1251 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 ARSEP51690 589 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 ZNF135P52742 658 aaPredicted RBP11.72□□□□□ -0.53
ACTN4-206ENST00000489451 MAPK10P53779 464 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 CYP4F2P78329 520 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 NFKB2Q00653 900 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 CTBSQ01459 385 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 DPTQ07507 201 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 KLHL30Q0D2K2 578 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 NFATC3Q12968 1075 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 ARHGEF7Q14155 803 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 IQCB1Q15051 598 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 AMZ1Q400G9 498 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 MAP9Q49MG5 647 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 PHF19Q5T6S3 580 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 NKAIN2Q5VXU1 208 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 SLC30A9Q6PML9 568 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 TMCO3Q6UWJ1 677 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 USP53Q70EK8 1073 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 TRIM74Q86UV6 250 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 NIPA2Q8N8Q9 360 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 FAM71BQ8TC56 605 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 SCRN2Q96FV2 425 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 THAP2Q9H0W7 228 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 CBX8Q9HC52 389 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 PHPT1Q9NRX4 125 aaPredicted RBP11.72□□□□□ -0.53
ACTN4-206ENST00000489451 TRNAU1APQ9NX07 287 aaKnown RBP11.72□□□□□ -0.53
ACTN4-206ENST00000489451 CD84Q9UIB8 345 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 SCINQ9Y6U3 715 aa11.72□□□□□ -0.53
ACTN4-206ENST00000489451 PSMD11O00231 422 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 CPNE6O95741 557 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 PRLP01236 227 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 TPM3P06753 285 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 PBX1P40424 430 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 MMP13P45452 471 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 PTSQ03393 145 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 NR1I3Q14994 352 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 TSR1Q2NL82 804 aaKnown RBP11.71□□□□□ -0.53
ACTN4-206ENST00000489451 FAM182AQ5T1J6 154 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 LRRC66Q68CR7 880 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 NCBP2-AS2Q69YL0 99 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 ALG1LQ6GMV1 187 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 RAET1GQ6H3X3 334 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 LUZP1Q86V48 1076 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 ATPAF2Q8N5M1 289 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 KIAA1524Q8TCG1 905 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 LRRN4Q8WUT4 740 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 SCAMP4Q969E2 229 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 TMEM159Q96B96 161 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 CCDC74BQ96LY2 380 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 WDR24Q96S15 920 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 CMKLR1Q99788 373 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 GSDMCQ9BYG8 508 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 ABCG8Q9H221 673 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 NT5MQ9NPB1 228 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 STARD5Q9NSY2 213 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 TMEM98Q9Y2Y6 226 aa11.71□□□□□ -0.53
ACTN4-206ENST00000489451 IGHV1OR21-1A0A087WYE8 117 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 A0A0J9YYE9 177 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 A0A1W2PQ67 120 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 PDE2AO00408 941 aaPredicted RBP11.7□□□□□ -0.54
ACTN4-206ENST00000489451 TERTO14746 1132 aaKnown RBP11.7□□□□□ -0.54
ACTN4-206ENST00000489451 MAP3K6O95382 1288 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 TRBC1P01850 177 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 FAM87AP0C7U9 286 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 MYBL1P10243 752 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 THRAP10827 490 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 CYP2A6P11509 494 aaPredicted RBP11.7□□□□□ -0.54
ACTN4-206ENST00000489451 MPSTP25325 297 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 ALDH4A1P30038 563 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 ARL4AP40617 200 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 LIMK2P53671 638 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 UBASH3AP57075 661 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 FANCCQ00597 558 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 DSC2Q02487 901 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 NIPAL4Q0D2K0 466 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 ILF3Q12906 894 aaKnown RBP eCLIP11.7□□□□□ -0.54
ACTN4-206ENST00000489451 UBAP2LQ14157 1087 aaKnown RBP11.7□□□□□ -0.54
ACTN4-206ENST00000489451 CLCA4Q14CN2 919 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 TBR1Q16650 682 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 ATP13A4Q4VNC1 1196 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms