RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ANKRD66B4E2M5 251 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 ZRANB2O95218 330 aaKnown RBP eCLIP24.9■■□□□ 1.586e-7■■□□□ 12.1
HMGN1-217ENST00000489072 PTPN3P26045 913 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 POLD2P49005 469 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 GALNT3Q14435 633 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 TEX44Q53QW1 395 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 ADAMTSL4Q6UY14 1074 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 NT5DC3Q86UY8 548 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 NLRP8Q86W28 1048 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 RCOR2Q8IZ40 523 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 ACRBPQ8NEB7 543 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 GPR156Q8NFN8 814 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 WDR24Q96S15 920 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 CCDC3Q9BQI4 270 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 MLPHQ9BV36 600 aaPredicted RBP24.9■■□□□ 1.58
HMGN1-217ENST00000489072 SLC25A51Q9H1U9 297 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 GLOD4Q9HC38 313 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 SLC17A4Q9Y2C5 497 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 GPSM3Q9Y4H4 160 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 UNC13CQ8NB66 2214 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 ADAMTS20P59510 1910 aa24.9■■□□□ 1.58
HMGN1-217ENST00000489072 C1orf232A0A0U1RR37 186 aa24.89■■□□□ 1.58
HMGN1-217ENST00000489072 OGFOD3Q6PK18 319 aa24.89■■□□□ 1.58
HMGN1-217ENST00000489072 BZW1Q7L1Q6 419 aaKnown RBP24.89■■□□□ 1.58
HMGN1-217ENST00000489072 KDELC2Q7Z4H8 507 aa24.89■■□□□ 1.58
HMGN1-217ENST00000489072 TRIM74Q86UV6 250 aa24.89■■□□□ 1.58
HMGN1-217ENST00000489072 NRROSQ86YC3 692 aa24.89■■□□□ 1.58
HMGN1-217ENST00000489072 NRSN1Q8IZ57 195 aa24.89■■□□□ 1.58
HMGN1-217ENST00000489072 FAM46DQ8NEK8 389 aa24.89■■□□□ 1.58
HMGN1-217ENST00000489072 EXD1Q8NHP7 514 aa24.89■■□□□ 1.58
HMGN1-217ENST00000489072 SPATA22Q8NHS9 363 aa24.89■■□□□ 1.58
HMGN1-217ENST00000489072 CCDC74AQ96AQ1 378 aa24.89■■□□□ 1.58
HMGN1-217ENST00000489072 HAUS1Q96CS2 278 aa24.89■■□□□ 1.58
HMGN1-217ENST00000489072 RIOK2Q9BVS4 552 aaKnown RBP24.89■■□□□ 1.58
HMGN1-217ENST00000489072 LACRTQ9GZZ8 138 aa24.89■■□□□ 1.58
HMGN1-217ENST00000489072 SUFUQ9UMX1 484 aa24.89■■□□□ 1.58
HMGN1-217ENST00000489072 ZFC3H1O60293 1989 aaKnown RBP24.89■■□□□ 1.57
HMGN1-217ENST00000489072 NOBOXO60393 691 aa24.88■■□□□ 1.57
HMGN1-217ENST00000489072 BRINP1O60477 761 aa24.88■■□□□ 1.57
HMGN1-217ENST00000489072 GNPDA1P46926 289 aa24.88■■□□□ 1.57
HMGN1-217ENST00000489072 WASHC5Q12768 1159 aa24.88■■□□□ 1.57
HMGN1-217ENST00000489072 ISXQ2M1V0 245 aa24.88■■□□□ 1.57
HMGN1-217ENST00000489072 DOK6Q6PKX4 331 aa24.88■■□□□ 1.57
HMGN1-217ENST00000489072 TMEM139Q8IV31 216 aa24.88■■□□□ 1.57
HMGN1-217ENST00000489072 CCDC50Q8IVM0 306 aa24.88■■□□□ 1.57
HMGN1-217ENST00000489072 GPBAR1Q8TDU6 330 aa24.88■■□□□ 1.57
HMGN1-217ENST00000489072 TFB1MQ8WVM0 346 aaKnown RBP24.88■■□□□ 1.57
HMGN1-217ENST00000489072 RBM41Q96IZ5 413 aaKnown RBP24.88■■□□□ 1.57
HMGN1-217ENST00000489072 TEKT5Q96M29 485 aa24.88■■□□□ 1.57
HMGN1-217ENST00000489072 ADGRE3Q9BY15 652 aa24.88■■□□□ 1.57
HMGN1-217ENST00000489072 RALYQ9UKM9 306 aaKnown RBP24.88■■□□□ 1.57
HMGN1-217ENST00000489072 TMEM98Q9Y2Y6 226 aa24.88■■□□□ 1.57
HMGN1-217ENST00000489072 ST14Q9Y5Y6 855 aa24.88■■□□□ 1.57
HMGN1-217ENST00000489072 BTNL10A8MVZ5 291 aa24.87■■□□□ 1.57
HMGN1-217ENST00000489072 TLX3O43711 291 aaPredicted RBP24.87■■□□□ 1.57
HMGN1-217ENST00000489072 USP12O75317 370 aa24.87■■□□□ 1.57
HMGN1-217ENST00000489072 MT-CYBP00156 380 aaPredicted RBP24.87■■□□□ 1.57
HMGN1-217ENST00000489072 IVLP07476 585 aa24.87■■□□□ 1.57
HMGN1-217ENST00000489072 CD68P34810 354 aaPredicted RBP24.87■■□□□ 1.57
HMGN1-217ENST00000489072 CTNNA1P35221 906 aaKnown RBP24.87■■□□□ 1.57
HMGN1-217ENST00000489072 SPINT3P49223 89 aa24.87■■□□□ 1.57
HMGN1-217ENST00000489072 SLC14A2Q15849 920 aa24.87■■□□□ 1.57
HMGN1-217ENST00000489072 PCSK7Q16549 785 aa24.87■■□□□ 1.57
HMGN1-217ENST00000489072 RBM44Q6ZP01 1051 aaKnown RBP24.87■■□□□ 1.57
HMGN1-217ENST00000489072 LYSMD3Q7Z3D4 306 aa24.87■■□□□ 1.57
HMGN1-217ENST00000489072 ZC3H18Q86VM9 953 aaKnown RBP24.87■■□□□ 1.57
HMGN1-217ENST00000489072 RAVER1Q8IY67 606 aaKnown RBP24.87■■□□□ 1.57
HMGN1-217ENST00000489072 P3H4Q92791 437 aa24.87■■□□□ 1.57
HMGN1-217ENST00000489072 EID2BQ96D98 161 aa24.87■■□□□ 1.57
HMGN1-217ENST00000489072 SCARF2Q96GP6 870 aaPredicted RBP24.87■■□□□ 1.57
HMGN1-217ENST00000489072 HERPUD2Q9BSE4 406 aa24.87■■□□□ 1.57
HMGN1-217ENST00000489072 HEMGNQ9BXL5 484 aa24.87■■□□□ 1.57
HMGN1-217ENST00000489072 SPATS2LQ9NUQ6 558 aaKnown RBP24.87■■□□□ 1.57
HMGN1-217ENST00000489072 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.87■■□□□ 1.57
HMGN1-217ENST00000489072 B4DGG1 531 aa24.86■■□□□ 1.57
HMGN1-217ENST00000489072 NTN3O00634 580 aaPredicted RBP24.86■■□□□ 1.57
HMGN1-217ENST00000489072 IPO7O95373 1038 aaKnown RBP24.86■■□□□ 1.57
HMGN1-217ENST00000489072 PIRTP0C851 137 aa24.86■■□□□ 1.57
HMGN1-217ENST00000489072 CDK18Q07002 472 aa24.86■■□□□ 1.57
HMGN1-217ENST00000489072 PPP2R5EQ16537 467 aa24.86■■□□□ 1.57
HMGN1-217ENST00000489072 C19orf48Q6RUI8 117 aa24.86■■□□□ 1.57
HMGN1-217ENST00000489072 BBS12Q6ZW61 710 aa24.86■■□□□ 1.57
HMGN1-217ENST00000489072 COX14Q96I36 57 aa24.86■■□□□ 1.57
HMGN1-217ENST00000489072 HIC2Q96JB3 615 aa24.86■■□□□ 1.57
HMGN1-217ENST00000489072 BAG1Q99933 345 aaPredicted RBP24.86■■□□□ 1.57
HMGN1-217ENST00000489072 DPEP2Q9H4A9 486 aa24.86■■□□□ 1.57
HMGN1-217ENST00000489072 TRNAU1APQ9NX07 287 aaKnown RBP24.86■■□□□ 1.57
HMGN1-217ENST00000489072 A0A1W2PNU3 283 aaPredicted RBP24.85■■□□□ 1.57
HMGN1-217ENST00000489072 INPP4BO15327 924 aa24.85■■□□□ 1.57
HMGN1-217ENST00000489072 PJA2O43164 708 aa24.85■■□□□ 1.57
HMGN1-217ENST00000489072 TCEA3O75764 348 aa24.85■■□□□ 1.57
HMGN1-217ENST00000489072 MPOP05164 745 aa24.85■■□□□ 1.57
HMGN1-217ENST00000489072 PYGLP06737 847 aa24.85■■□□□ 1.57
HMGN1-217ENST00000489072 AK4P27144 223 aaPredicted RBP24.85■■□□□ 1.57
HMGN1-217ENST00000489072 ADCY8P40145 1251 aa24.85■■□□□ 1.57
HMGN1-217ENST00000489072 VAV2P52735 878 aa24.85■■□□□ 1.57
HMGN1-217ENST00000489072 PDX1P52945 283 aa24.85■■□□□ 1.57
HMGN1-217ENST00000489072 HENMT1Q5T8I9 393 aaKnown RBP24.85■■□□□ 1.57
HMGN1-217ENST00000489072 ATXN7L3BQ96GX2 97 aa24.85■■□□□ 1.57
HMGN1-217ENST00000489072 QKIQ96PU8 341 aaKnown RBP eCLIP24.85■■□□□ 1.573e-41■■■■■ 75.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms