RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 PHF13Q86YI8 300 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 UNC45BQ8IWX7 931 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 CCDC112Q8NEF3 446 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 SLC30A5Q8TAD4 765 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 KIAA1524Q8TCG1 905 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 CLEC4CQ8WTT0 213 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 ATP2A3Q93084 1043 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 OTUB2Q96DC9 234 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 MSANTD3Q96H12 275 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 VCPIP1Q96JH7 1222 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 ZNF830Q96NB3 372 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 PCDHB18PQ96TA0 734 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 SELENOOQ9BVL4 669 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 FAM204AQ9H8W3 233 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 TRPV5Q9NQA5 729 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 ABHD10Q9NUJ1 306 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 SLC12A6Q9UHW9 1150 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 INTUQ9ULD6 942 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 PAXBP1Q9Y5B6 917 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 FAM171A2A8MVW0 826 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 CCP110O43303 1012 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 RTN2O75298 545 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 RFPL1O75677 317 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 GRAP2O75791 330 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 APOEP02649 317 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 HMBSP08397 361 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 VSIG10L2P0DP72 767 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 MYBL1P10243 752 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 SLC2A3P11169 496 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 KRT3P12035 628 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 CORO1AP31146 461 aaKnown RBP8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 HNRNPH3P31942 346 aaKnown RBP8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 CHKAP35790 457 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 MATKP42679 507 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 CXCL12P48061 93 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 WNT3AP56704 352 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 TBX4P57082 545 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 DUSP2Q05923 314 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 MTA1Q13330 715 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 FZD5Q13467 585 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 RUNX3Q13761 415 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 TBR1Q16650 682 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 ITPRIPL2Q3MIP1 535 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 GAGE13Q4V321 117 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 C19orf54Q5BKX5 351 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 NUGGCQ68CJ6 796 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 DCUN1D2Q6PH85 259 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 OLFML1Q6UWY5 402 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 HTR3DQ70Z44 454 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 XYLT1Q86Y38 959 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 WDR75Q8IWA0 830 aaKnown RBP8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 DEFB106AQ8N104 65 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 DQX1Q8TE96 717 aaKnown RBP8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 NRG4Q8WWG1 115 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 RSPRY1Q96DX4 576 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 ZFYVE19Q96K21 471 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 CCDC42Q96M95 316 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 LMF1Q96S06 567 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 DDX50Q9BQ39 737 aaKnown RBP8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 SCNM1Q9BWG6 230 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 ARRDC1-AS1Q9H2J1 176 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 EBF3Q9H4W6 596 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 C8orf33Q9H7E9 229 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 DMRT3Q9NQL9 472 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 PARVAQ9NVD7 372 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 ING3Q9NXR8 418 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 NDRG2Q9UN36 371 aaKnown RBP8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 NAALADL1Q9UQQ1 740 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 WNT6Q9Y6F9 365 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 LOC400499M0QZD8 3231 aa8.26□□□□□ -1.09
TRAPPC12-221ENST00000489032 MAST4O15021 2626 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 FAM170AA1A519 330 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 STC2O76061 302 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 LATS1O95835 1130 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 TRUB2O95900 331 aaKnown RBP8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 SCGB1D2O95969 90 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 F9P00740 461 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 FTLP02792 175 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 ECHS1P30084 290 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 SLC11A2P49281 568 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 SULT1E1P49888 294 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 GSCP56915 257 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 TBX2Q13207 712 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 SRSF5Q13243 272 aaKnown RBP8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 TAF5Q15542 800 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 CCDC6Q16204 474 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 PREPLQ4J6C6 727 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 C2CD6Q53TS8 623 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 DNTTIP2Q5QJE6 756 aaKnown RBP8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 CCDC122Q5T0U0 273 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 SYPL2Q5VXT5 272 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 ALKBH5Q6P6C2 394 aaKnown RBP8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 MON1BQ7L1V2 547 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 ARCQ7LC44 396 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 PHLDB2Q86SQ0 1253 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 TAC4Q86UU9 113 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 LONP2Q86WA8 852 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 MCOLN2Q8IZK6 566 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 ATP6V0D2Q8N8Y2 350 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms