RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SLC25A11Q02978 314 aaKnown RBP18.36■□□□□ 0.53
HDAC6-231ENST00000488905 BIRC2Q13490 618 aa18.36■□□□□ 0.53
HDAC6-231ENST00000488905 PEX6Q13608 980 aa18.36■□□□□ 0.53
HDAC6-231ENST00000488905 PIGHQ14442 188 aaPredicted RBP18.36■□□□□ 0.53
HDAC6-231ENST00000488905 TMEM164Q5U3C3 297 aa18.36■□□□□ 0.53
HDAC6-231ENST00000488905 LRRC66Q68CR7 880 aa18.36■□□□□ 0.53
HDAC6-231ENST00000488905 TECPR1Q7Z6L1 1165 aa18.36■□□□□ 0.53
HDAC6-231ENST00000488905 NIPA2Q8N8Q9 360 aa18.36■□□□□ 0.53
HDAC6-231ENST00000488905 CCDC74BQ96LY2 380 aa18.36■□□□□ 0.53
HDAC6-231ENST00000488905 ARHGAP9Q9BRR9 750 aa18.36■□□□□ 0.53
HDAC6-231ENST00000488905 NT5MQ9NPB1 228 aa18.36■□□□□ 0.53
HDAC6-231ENST00000488905 TMEM63CQ9P1W3 806 aa18.36■□□□□ 0.53
HDAC6-231ENST00000488905 PYCARD-AS1I3L0S3 204 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 CCL4P13236 92 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 CD1CP29017 333 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 ACTR1BP42025 376 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 ACTR1AP61163 376 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 NFATC3Q12968 1075 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 TDRD12Q587J7 1177 aaKnown RBP18.35■□□□□ 0.53
HDAC6-231ENST00000488905 XKR5Q6UX68 686 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 ADAMTSL4Q6UY14 1074 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 ZNF574Q6ZN55 896 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-231ENST00000488905 PRICKLE2Q7Z3G6 844 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 TEX26Q8N6G2 289 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 ZSCAN1Q8NBB4 408 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 PIH1D2Q8WWB5 315 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 SCARF2Q96GP6 870 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-231ENST00000488905 OR2M4Q96R27 311 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 RCOR3Q9P2K3 495 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-231ENST00000488905 CD84Q9UIB8 345 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 ANAPC7Q9UJX3 599 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 COL12A1Q99715 3063 aa18.35■□□□□ 0.53
HDAC6-231ENST00000488905 UBR5O95071 2799 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-231ENST00000488905 A0A0U1RQS6 177 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 STMND1H3BQB6 276 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 MFSD11O43934 449 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 FZD6O60353 706 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 PDHA1P08559 390 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 WT1P19544 449 aaPredicted RBP18.34■□□□□ 0.53
HDAC6-231ENST00000488905 CSF2RBP32927 897 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 LIMK2P53671 638 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 TRA2AQ13595 282 aaKnown RBP eCLIP18.34■□□□□ 0.53
HDAC6-231ENST00000488905 KRT81Q14533 505 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 RFLNAQ6ZTI6 216 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 TRIM74Q86UV6 250 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 NDUFAF2Q8N183 169 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 AP2M1Q96CW1 435 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 BTBD6Q96KE9 485 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 NAP1L5Q96NT1 182 aaPredicted RBP18.34■□□□□ 0.53
HDAC6-231ENST00000488905 SEMA3CQ99985 751 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 POLR1EQ9GZS1 481 aaKnown RBP18.34■□□□□ 0.53
HDAC6-231ENST00000488905 THAP2Q9H0W7 228 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 ABCG8Q9H221 673 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 CLMPQ9H6B4 373 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 HECTD1Q9ULT8 2610 aa18.34■□□□□ 0.53
HDAC6-231ENST00000488905 MAST4O15021 2626 aa18.33■□□□□ 0.53
HDAC6-231ENST00000488905 IGHV1OR21-1A0A087WYE8 117 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 A0A0J9YYE9 177 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 PPM1DO15297 605 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 TRBC1P01850 177 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 THRAP10827 490 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 ZNF30P17039 623 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 FIGNQ5HY92 759 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 NKAIN2Q5VXU1 208 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 HGSNATQ68CP4 663 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 ALG1LQ6GMV1 187 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 ZNF765Q7L2R6 523 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 LRRC49Q8IUZ0 686 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 OR4D9Q8NGE8 314 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 SCAMP4Q969E2 229 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 PMEPA1Q969W9 287 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 SMIM14Q96QK8 99 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 NUP85Q9BW27 656 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 FAM117AQ9C073 453 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 IP6K2Q9UHH9 426 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 TMEM98Q9Y2Y6 226 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 PLEKHM1Q9Y4G2 1056 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 HEMK1Q9Y5R4 338 aaPredicted RBP18.33■□□□□ 0.52
HDAC6-231ENST00000488905 PTPN13Q12923 2485 aa18.33■□□□□ 0.52
HDAC6-231ENST00000488905 PYGLP06737 847 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 CD48P09326 243 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 FAM87AP0C7U9 286 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 FGF3P11487 239 aaPredicted RBP18.32■□□□□ 0.52
HDAC6-231ENST00000488905 GARSP41250 739 aaKnown RBP18.32■□□□□ 0.52
HDAC6-231ENST00000488905 ZNF165P49910 485 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 ARSDP51689 593 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 PTSQ03393 145 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 ITKQ08881 620 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 GALNT2Q10471 571 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 MMRN1Q13201 1228 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 PYCR3Q53H96 274 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 MARK2Q7KZI7 788 aaKnown RBP18.32■□□□□ 0.52
HDAC6-231ENST00000488905 CCDC112Q8NEF3 446 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 FAM71BQ8TC56 605 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 HTR3CQ8WXA8 447 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 TAAR9Q96RI9 348 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 DPYSL5Q9BPU6 564 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 TDRD1Q9BXT4 1180 aaKnown RBP18.32■□□□□ 0.52
HDAC6-231ENST00000488905 ZMYND15Q9H091 742 aa18.32■□□□□ 0.52
HDAC6-231ENST00000488905 STARD5Q9NSY2 213 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms