RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 BPIP17213 487 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 TPSB2P20231 275 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 RABIFP47224 123 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 ZNF140P52738 457 aaPredicted RBP11.01□□□□□ -0.65
UBE4B-210ENST00000488228 THOP1P52888 689 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 CKAP4Q07065 602 aaKnown RBP11.01□□□□□ -0.65
UBE4B-210ENST00000488228 CDH17Q12864 832 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 MSLNQ13421 630 aaPredicted RBP11.01□□□□□ -0.65
UBE4B-210ENST00000488228 TPSAB1Q15661 275 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 WHAMMP3Q1A5X7 153 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 HLA-BQ31612 363 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 CCDC38Q502W7 563 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 PRAMEF14Q5SWL7 426 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 HENMT1Q5T8I9 393 aaKnown RBP11.01□□□□□ -0.65
UBE4B-210ENST00000488228 KCTD16Q68DU8 428 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 C4orf22Q6V702 233 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 ZNF765Q7L2R6 523 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 LINC00523Q86TU6 105 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 IQCHQ86VS3 1027 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 HEATR4Q86WZ0 1026 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 MINDY1Q8N5J2 469 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 DNAAF3Q8N9W5 541 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 GPR26Q8NDV2 337 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 FUBP1Q96AE4 644 aaKnown RBP11.01□□□□□ -0.65
UBE4B-210ENST00000488228 TRABDQ9H4I3 376 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 ARNT2Q9HBZ2 717 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 CASS4Q9NQ75 786 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 GDF3Q9NR23 364 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.01□□□□□ -0.65
UBE4B-210ENST00000488228 HS3ST3A1Q9Y663 406 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 ARID1BQ8NFD5 2236 aaPredicted RBP11.01□□□□□ -0.65
UBE4B-210ENST00000488228 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 GOLGA8MH3BSY2 632 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 SCAMP1O15126 338 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 INPP4BO15327 924 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 RAD51CO43502 376 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 LDB2O43679 373 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 CER1O95813 267 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 SYPP08247 313 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 TSHRP16473 764 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 DEKP35659 375 aaKnown RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 HMGCLP35914 325 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 ADCY8P40145 1251 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 MAGEA6P43360 314 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 GPR1P46091 355 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 ATXN3P54252 364 aaPredicted RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 SESN2P58004 480 aaPredicted RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 KIAA1024LP59773 190 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 DCDC1P59894 354 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 CRADDP78560 199 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 CDK3Q00526 305 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 DPTQ07507 201 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 OVGP1Q12889 678 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 DHX34Q14147 1143 aaKnown RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 FZD2Q14332 565 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 NFATC4Q14934 902 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 TAF1AQ15573 450 aaPredicted RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 ZNF542PQ5EBM4 170 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 CERCAMQ5T4B2 595 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 IZUMO3Q5VZ72 239 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 PNCKQ6P2M8 343 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 DOK6Q6PKX4 331 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 FAM151BQ6UXP7 276 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 MACC1Q6ZN28 852 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 ZNF572Q7Z3I7 529 aaPredicted RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 PARGQ86W56 976 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 NRSN1Q8IZ57 195 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 OR4K2Q8NGD2 314 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 OR13C4Q8NGS5 318 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 KIF18AQ8NI77 898 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 PDXPQ96GD0 296 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 DNAJC1Q96KC8 554 aaKnown RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 RUNDC3BQ96NL0 473 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 SRPK1Q96SB4 655 aaKnown RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 APOOQ9BUR5 198 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 LGR4Q9BXB1 951 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 SPATA16Q9BXB7 569 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 TRIM31Q9BZY9 425 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 FAM83DQ9H4H8 585 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 GAREM1Q9H706 876 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 FGF22Q9HCT0 170 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 TMEM9BQ9NQ34 198 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 IL17CQ9P0M4 197 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 NFKBIL1Q9UBC1 381 aaPredicted RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 FEZ2Q9UHY8 353 aaPredicted RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 FKBPLQ9UIM3 349 aa11□□□□□ -0.65
UBE4B-210ENST00000488228 PNMA8BQ9ULN7 279 aaPredicted RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 CNOT1A5YKK6 2376 aaKnown RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 ARHGEF17Q96PE2 2063 aaPredicted RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 GOLGA4Q13439 2230 aaKnown RBP11□□□□□ -0.65
UBE4B-210ENST00000488228 SPTY2D1-AS1A0A0U1RR47 76 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 CACNB4O00305 520 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-210ENST00000488228 GAPDHSO14556 408 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-210ENST00000488228 CDX4O14627 284 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-210ENST00000488228 STX7O15400 261 aaKnown RBP10.99□□□□□ -0.65
UBE4B-210ENST00000488228 MAGEC1O60732 1142 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 SDC3O75056 442 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 CRTAMO95727 393 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 TUBB4AP04350 444 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 MYCLP1P12525 358 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms