RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 TMEM159Q96B96 161 aa12.41□□□□□ -0.42
SREBF1-215ENST00000487401 TRPM6Q9BX84 2022 aa12.41□□□□□ -0.42
SREBF1-215ENST00000487401 MAK16Q9BXY0 300 aaKnown RBP12.41□□□□□ -0.42
SREBF1-215ENST00000487401 PACSIN1Q9BY11 444 aa12.41□□□□□ -0.42
SREBF1-215ENST00000487401 ABCG8Q9H221 673 aa12.41□□□□□ -0.42
SREBF1-215ENST00000487401 AKAP7Q9P0M2 348 aaPredicted RBP12.41□□□□□ -0.42
SREBF1-215ENST00000487401 PISDQ9UG56 409 aa12.41□□□□□ -0.42
SREBF1-215ENST00000487401 NENFQ9UMX5 172 aa12.41□□□□□ -0.42
SREBF1-215ENST00000487401 CHKBQ9Y259 395 aa12.41□□□□□ -0.42
SREBF1-215ENST00000487401 SLC17A4Q9Y2C5 497 aa12.41□□□□□ -0.42
SREBF1-215ENST00000487401 TMEM98Q9Y2Y6 226 aa12.41□□□□□ -0.42
SREBF1-215ENST00000487401 LOXL2Q9Y4K0 774 aa12.41□□□□□ -0.42
SREBF1-215ENST00000487401 PCDHGA7Q9Y5G6 932 aa12.41□□□□□ -0.42
SREBF1-215ENST00000487401 ADAMTS20P59510 1910 aa12.41□□□□□ -0.42
SREBF1-215ENST00000487401 ARID1BQ8NFD5 2236 aaPredicted RBP12.4□□□□□ -0.42
SREBF1-215ENST00000487401 A0A0U1RQS6 177 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 ERVH48-1M5A8F1 160 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 AGRPO00253 132 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 ECEL1O95672 775 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 JCHAINP01591 159 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 FUCA1P04066 466 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 TMEM253P0C7T8 217 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 KDELR1P24390 212 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 AK4P27144 223 aaPredicted RBP12.4□□□□□ -0.42
SREBF1-215ENST00000487401 SLC5A2P31639 672 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 ADCY8P40145 1251 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 STC1P52823 247 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 MAZP56270 477 aaKnown RBP12.4□□□□□ -0.42
SREBF1-215ENST00000487401 OR1D5P58170 312 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 RPL26P61254 145 aaKnown RBP12.4□□□□□ -0.42
SREBF1-215ENST00000487401 CTBSQ01459 385 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 GBE1Q04446 702 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 ZFP36L1Q07352 338 aaKnown RBP12.4□□□□□ -0.42
SREBF1-215ENST00000487401 CLN3Q13286 438 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 SKOR2Q2VWA4 1001 aaPredicted RBP12.4□□□□□ -0.42
SREBF1-215ENST00000487401 MAP9Q49MG5 647 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 ODF2Q5BJF6 829 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 PHF19Q5T6S3 580 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 ALG1LQ6GMV1 187 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 MARK2Q7KZI7 788 aaKnown RBP12.4□□□□□ -0.42
SREBF1-215ENST00000487401 PIM3Q86V86 326 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 NLRP8Q86W28 1048 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 CCDC13Q8IYE1 715 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 PQLC3Q8N755 202 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 LPCAT1Q8NF37 534 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.4□□□□□ -0.42
SREBF1-215ENST00000487401 LRRN4Q8WUT4 740 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 RAPGEF5Q92565 580 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 SCAMP4Q969E2 229 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 FAF2Q96CS3 445 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 SMIM14Q96QK8 99 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 CMKLR1Q99788 373 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 RIOK2Q9BVS4 552 aaKnown RBP12.4□□□□□ -0.42
SREBF1-215ENST00000487401 TDRD1Q9BXT4 1180 aaKnown RBP12.4□□□□□ -0.42
SREBF1-215ENST00000487401 CDH19Q9H159 772 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 PCDH9Q9HC56 1237 aa12.4□□□□□ -0.42
SREBF1-215ENST00000487401 RPL26L1Q9UNX3 145 aaKnown RBP12.4□□□□□ -0.42
SREBF1-215ENST00000487401 LOC400499M0QZD8 3231 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 SSU72P8A0A1W2PR75 194 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 CAPN8A6NHC0 703 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 NVLO15381 856 aaKnown RBP12.39□□□□□ -0.43
SREBF1-215ENST00000487401 B4GAT1O43505 415 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 ASMTLO95671 621 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 HLA-DQB2P05538 268 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 ACTR1BP42025 376 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 ACTR1AP61163 376 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 B4GALNT1Q00973 533 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 NIPAL4Q0D2K0 466 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 CLPPQ16740 277 aaPredicted RBP12.39□□□□□ -0.43
SREBF1-215ENST00000487401 ASTE1Q2TB18 679 aaPredicted RBP12.39□□□□□ -0.43
SREBF1-215ENST00000487401 CCDC81Q6ZN84 652 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 USP53Q70EK8 1073 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 C17orf82Q86X59 251 aaPredicted RBP12.39□□□□□ -0.43
SREBF1-215ENST00000487401 GALNT13Q8IUC8 556 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 EXD1Q8NHP7 514 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 SLC35G2Q8TBE7 412 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 ARRDC2Q8TBH0 407 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 CCHCR1Q8TD31 782 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 PTCD2Q8WV60 388 aaKnown RBP12.39□□□□□ -0.43
SREBF1-215ENST00000487401 SCARF2Q96GP6 870 aaPredicted RBP12.39□□□□□ -0.43
SREBF1-215ENST00000487401 CCDC42Q96M95 316 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 RNF157Q96PX1 679 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 OR2M4Q96R27 311 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 DNAJC7Q99615 494 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 ADGRE3Q9BY15 652 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 DTLQ9NZJ0 730 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 PLEKHM1Q9Y4G2 1056 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 HEY1Q9Y5J3 304 aa12.39□□□□□ -0.43
SREBF1-215ENST00000487401 C1orf232A0A0U1RR37 186 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 LRRD1A4D1F6 860 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 KCNK1O00180 336 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 INPP4BO15327 924 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 CLDN7O95471 211 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 CPNE6O95741 557 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 SOD1P00441 154 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 PRLP01236 227 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 ZFXP17010 805 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-215ENST00000487401 CD86P42081 329 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 ARHGAP25P42331 645 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 GPR3P46089 330 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms