RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 B4GALNT1Q00973 533 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 CTBSQ01459 385 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 NIPAL4Q0D2K0 466 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 CLN3Q13286 438 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 AMZ1Q400G9 498 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 ZFYVE27Q5T4F4 411 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 TIGD7Q6NT04 549 aaPredicted RBP24.47■■□□□ 1.51
LIME1-206ENST00000487026 TRIM74Q86UV6 250 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 MAP7D3Q8IWC1 876 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 NDUFAF2Q8N183 169 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 ARRDC2Q8TBH0 407 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 PATE1Q8WXA2 126 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 TSGA13Q96PP4 275 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 AGAP2Q99490 1192 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 TRNAU1APQ9NX07 287 aaKnown RBP24.47■■□□□ 1.51
LIME1-206ENST00000487026 PISDQ9UG56 409 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 SLC17A4Q9Y2C5 497 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 LOXL2Q9Y4K0 774 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 ECEL1O95672 775 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 PRLP01236 227 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 HLA-DQB2P05538 268 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 KRT10P13645 584 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 TEAD1P28347 426 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 ALDH4A1P30038 563 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 ADCY8P40145 1251 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 ZFP36L1Q07352 338 aaKnown RBP24.46■■□□□ 1.51
LIME1-206ENST00000487026 DPTQ07507 201 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 VAC14Q08AM6 782 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 C19orf57Q0VDD7 668 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 EIF3IQ13347 325 aaKnown RBP24.46■■□□□ 1.51
LIME1-206ENST00000487026 SLC18A3Q16572 532 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 ALG1LQ6GMV1 187 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 LSM14AQ8ND56 463 aaKnown RBP24.46■■□□□ 1.51
LIME1-206ENST00000487026 CCNYQ8ND76 341 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 RAPGEF5Q92565 580 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 SEMA6CQ9H3T2 930 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 RDH14Q9HBH5 336 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.46■■□□□ 1.51
LIME1-206ENST00000487026 ATMQ13315 3056 aa24.46■■□□□ 1.51
LIME1-206ENST00000487026 CLDN7O95471 211 aa24.45■■□□□ 1.5
LIME1-206ENST00000487026 KRT7P08729 469 aa24.45■■□□□ 1.5
LIME1-206ENST00000487026 JMJD7P0C870 316 aa24.45■■□□□ 1.5
LIME1-206ENST00000487026 ITIH1P19827 911 aa24.45■■□□□ 1.5
LIME1-206ENST00000487026 KDELR1P24390 212 aa24.45■■□□□ 1.5
LIME1-206ENST00000487026 MESDQ14696 234 aa24.45■■□□□ 1.5
LIME1-206ENST00000487026 ASTE1Q2TB18 679 aaPredicted RBP24.45■■□□□ 1.5
LIME1-206ENST00000487026 TAF1BQ53T94 588 aaPredicted RBP24.45■■□□□ 1.5
LIME1-206ENST00000487026 ADAMTSL4Q6UY14 1074 aa24.45■■□□□ 1.5
LIME1-206ENST00000487026 USP53Q70EK8 1073 aa24.45■■□□□ 1.5
LIME1-206ENST00000487026 MARK2Q7KZI7 788 aaKnown RBP24.45■■□□□ 1.5
LIME1-206ENST00000487026 C17orf82Q86X59 251 aaPredicted RBP24.45■■□□□ 1.5
LIME1-206ENST00000487026 FAF2Q96CS3 445 aa24.45■■□□□ 1.5
LIME1-206ENST00000487026 TDRD1Q9BXT4 1180 aaKnown RBP24.45■■□□□ 1.5
LIME1-206ENST00000487026 RHPN2P1A8MT19 583 aa24.44■■□□□ 1.5
LIME1-206ENST00000487026 JCHAINP01591 159 aa24.44■■□□□ 1.5
LIME1-206ENST00000487026 TPM3P06753 285 aa24.44■■□□□ 1.5
LIME1-206ENST00000487026 IVLP07476 585 aa24.44■■□□□ 1.5
LIME1-206ENST00000487026 CES1P23141 567 aa24.44■■□□□ 1.5
LIME1-206ENST00000487026 PHF19Q5T6S3 580 aa24.44■■□□□ 1.5
LIME1-206ENST00000487026 LPCAT1Q8NF37 534 aa24.44■■□□□ 1.5
LIME1-206ENST00000487026 OR8K1Q8NGG5 319 aa24.44■■□□□ 1.5
LIME1-206ENST00000487026 RIOK2Q9BVS4 552 aaKnown RBP24.44■■□□□ 1.5
LIME1-206ENST00000487026 DEF6Q9H4E7 631 aa24.44■■□□□ 1.5
LIME1-206ENST00000487026 DTLQ9NZJ0 730 aa24.44■■□□□ 1.5
LIME1-206ENST00000487026 PCDHGA7Q9Y5G6 932 aa24.44■■□□□ 1.5
LIME1-206ENST00000487026 ERVH48-1M5A8F1 160 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 INPP4BO15327 924 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 ZNF30P17039 623 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 ETV5P41161 510 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 STC1P52823 247 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 RHDQ02161 417 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 TGIF1Q15583 401 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 CCDC81Q6ZN84 652 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 SLITRK4Q8IW52 837 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 NAGSQ8N159 534 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 FATE1Q969F0 183 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 SCARF2Q96GP6 870 aaPredicted RBP24.43■■□□□ 1.5
LIME1-206ENST00000487026 RNF157Q96PX1 679 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 DNAJC7Q99615 494 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 PCDH9Q9HC56 1237 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 AMACRQ9UHK6 382 aa24.43■■□□□ 1.5
LIME1-206ENST00000487026 CFAP46Q8IYW2 2715 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 CAPN8A6NHC0 703 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 KCNK1O00180 336 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 TMEM253P0C7T8 217 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 MX2P20592 715 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 ACTR1BP42025 376 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 ACTR1AP61163 376 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 BIRC2Q13490 618 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 MAP9Q49MG5 647 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 KIAA1614Q5VZ46 1190 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 PIM3Q86V86 326 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 CCDC13Q8IYE1 715 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 ZNF843Q8N446 348 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 SLC35G2Q8TBE7 412 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 OR2M4Q96R27 311 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 CHP1Q99653 195 aa24.42■■□□□ 1.5
LIME1-206ENST00000487026 TRBV23OR9-2A0A075B6M9 112 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 K7ENP7 123 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 PPM1DO15297 605 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms