RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 ARIH1Q9Y4X5 557 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 PRSS51A0A1B0GVH4 220 aa17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 ADAM12O43184 909 aa17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 CDK14O94921 469 aa17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 PSMA3P25788 255 aa17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 SCNN1BP51168 640 aa17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 RARS2Q5T160 578 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 KLHDC10Q6PID8 442 aa17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 DENND1CQ8IV53 801 aa17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 CRIPAKQ8N1N5 446 aa17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 LPGAT1Q92604 370 aa17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 PLD4Q96BZ4 506 aa17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 RMDN1Q96DB5 314 aa17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 DCUN1D1Q96GG9 259 aa17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 TDRD1Q9BXT4 1180 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 PHF24Q9UPV7 400 aa17.94■□□□□ 0.46
PDLIM7-207ENST00000486828 UBA6A0AVT1 1052 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 ILVBLA1L0T0 632 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 ZNF840PA6NDX5 716 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 TBKBP1A7MCY6 615 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 E7ENX8 843 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 KERAO60938 352 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 RHOBTB1O94844 696 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 SIX3O95343 332 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 RHOCP08134 193 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 CCL5P13501 91 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 ACADVLP49748 655 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 PFKFB4Q16877 469 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 TCTN1Q2MV58 587 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 EML3Q32P44 896 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 HECTD3Q5T447 861 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 FAM219BQ5XKK7 198 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 SLC8B1Q6J4K2 584 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 HACD2Q6Y1H2 254 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 CATSPER1Q8NEC5 780 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 MDGA1Q8NFP4 955 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 OR4K2Q8NGD2 314 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 TOP1MTQ969P6 601 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 KIAA1191Q96A73 305 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 C3orf30Q96M34 536 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 KLHL32Q96NJ5 620 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 TRAPPC9Q96Q05 1148 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 TCF12Q99081 682 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 DERL2Q9GZP9 239 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 SCUBE2Q9NQ36 999 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 TAS2R13Q9NYV9 303 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 EPS15L1Q9UBC2 864 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 DNAJC15Q9Y5T4 150 aa17.93■□□□□ 0.46
PDLIM7-207ENST00000486828 ATP6AP2A0A1C7CYW4 349 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 CAPN8A6NHC0 703 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 MRASO14807 208 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 TRIM24O15164 1050 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 MAP3K13O43283 966 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 COCHO43405 550 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 ATP6AP2O75787 350 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 PRLP01236 227 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 HDCP19113 662 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 TCN1P20061 433 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 CES1P23141 567 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 TUFMP49411 452 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 STX1BP61266 288 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 TRIM25Q14258 630 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 CYTH1Q15438 398 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 PAOXQ6QHF9 649 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 CHST9Q7L1S5 443 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 FAM156AQ8NDB6 213 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 EXOC2Q96KP1 924 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 RNF208Q9H0X6 261 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 AKTIPQ9H8T0 292 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 COPS7BQ9H9Q2 264 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 FBRSL1Q9HCM7 1045 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 MID1IP1Q9NPA3 183 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 HACD3Q9P035 362 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 MTRRQ9UBK8 725 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 MED16Q9Y2X0 877 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 LRRC14BA6NHZ5 514 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 C2orf81A6NN90 581 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 AZIN1O14977 448 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 NRP2O60462 931 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 SRP72O76094 671 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 MT-CO1P00395 513 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 KLKB1P03952 638 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 ALDOCP09972 364 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 GFAPP14136 432 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 FMO4P31512 558 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 ATXN3P54252 364 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 FOLH1Q04609 750 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 ZNF177Q13360 481 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 SETMARQ53H47 684 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 KANK2Q63ZY3 851 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 PAQR3Q6TCH7 311 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 SPATA24Q86W54 205 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 TICAM1Q8IUC6 712 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 LILRA2Q8N149 483 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 ADCY4Q8NFM4 1077 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 STAG3L4Q8TBR4 150 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 FAM192AQ9GZU8 254 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 CCDC68Q9H2F9 335 aa17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 SPAG4Q9NPE6 437 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms