RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 GLYATL1P3A0A0U1RQE8 302 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 CCDC162PA2VCL2 907 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TBC1D3FA6NER0 549 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TBC1D3LB9A6J9 549 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 GPR39O43194 453 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 GPR37L1O60883 481 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 ERLIN1O75477 346 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TM7SF2O76062 418 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 PCDH8O95206 1070 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 PRAMEF1O95521 474 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 ACSL3O95573 720 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 IGHV4-34P06331 123 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TBC1D3HP0C7X1 549 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 PAMP19021 973 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 FOXN2P32314 431 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 FNTBP49356 437 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 CCR5P51681 352 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 PTPN5P54829 565 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TMPRSS15P98073 1019 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 DPTQ07507 201 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 ACOX1Q15067 660 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 KYNUQ16719 465 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 LONRF1Q17RB8 773 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 ZNF528Q3MIS6 628 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 BEND6Q5SZJ8 279 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-227ENST00000486806 KIAA0895LQ68EN5 471 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TBC1D3GQ6DHY5 549 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TBC1D3CQ6IPX1 549 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TRMT10BQ6PF06 316 aaKnown RBP9.54□□□□□ -0.88
MCF2L-227ENST00000486806 AFTPHQ6ULP2 937 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 CYS1Q717R9 158 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 NLRP8Q86W28 1048 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 LONP2Q86WA8 852 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 CNTN4Q8IWV2 1026 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 UNC5BQ8IZJ1 945 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TBC1D3Q8IZP1 549 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TP53I13Q8NBR0 393 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-227ENST00000486806 SCAMP4Q969E2 229 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 HDAC10Q969S8 669 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 NUS1Q96E22 293 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 CERS2Q96G23 380 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 CDKN2AIPNLQ96HQ2 116 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 SPACA7Q96KW9 195 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TBATAQ96M53 351 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 ORAI3Q9BRQ5 295 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 PCED1AQ9H1Q7 454 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 ABCG8Q9H221 673 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 C6orf106Q9H6K1 298 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-227ENST00000486806 SUDS3Q9H7L9 328 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-227ENST00000486806 RAD18Q9NS91 495 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 SMOXQ9NWM0 555 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 IL1RAPL1Q9NZN1 696 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 BPTFQ12830 3046 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 ATG2BQ96BY7 2078 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 ZNF106Q9H2Y7 1883 aaKnown RBP9.53□□□□□ -0.88
MCF2L-227ENST00000486806 TRBV5-4A0A0C4DH59 114 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 PRR23AA6NEV1 266 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 OR51F1A6NGY5 319 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 FAM47DPA6NHR8 397 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 FAM159BA6NKW6 160 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 AGAP14A8MT82 685 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 FADS2P1A8MWK0 482 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 LZTS3O60299 673 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-227ENST00000486806 SRP72O76094 671 aaKnown RBP9.53□□□□□ -0.88
MCF2L-227ENST00000486806 VAPBO95292 243 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 GOT2P00505 430 aaKnown RBP9.53□□□□□ -0.88
MCF2L-227ENST00000486806 BCKDHBP21953 392 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 TEAD1P28347 426 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 MC4RP32245 332 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 STX2P32856 288 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 CA5AP35218 305 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 HSD17B3P37058 310 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 NUBP1P53384 320 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 PRAMEP78395 509 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 CSTF1Q05048 431 aaKnown RBP9.53□□□□□ -0.88
MCF2L-227ENST00000486806 NFATC2Q13469 925 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 WSCD2Q2TBF2 565 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 USP39Q53GS9 565 aaKnown RBP9.53□□□□□ -0.88
MCF2L-227ENST00000486806 ALS2CLQ60I27 953 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 PDPK2PQ6A1A2 396 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 FBXO38Q6PIJ6 1188 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 FAM151BQ6UXP7 276 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 SLC36A4Q6YBV0 504 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 CAPN12Q6ZSI9 719 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 C3orf62Q6ZUJ4 267 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 KCNMB4Q86W47 210 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 PALM2Q8IXS6 379 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 PELI3Q8N2H9 469 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 TRAM1L1Q8N609 369 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 DENND6BQ8NEG7 585 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 CADM4Q8NFZ8 388 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 CENPTQ96BT3 561 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 AP2M1Q96CW1 435 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 LENG8Q96PV6 779 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-227ENST00000486806 AGAP2Q99490 1192 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 KLF6Q99612 283 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-227ENST00000486806 ZSCAN5AQ9BUG6 496 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 RIOK2Q9BVS4 552 aaKnown RBP9.53□□□□□ -0.88
MCF2L-227ENST00000486806 GPR174Q9BXC1 333 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 FAM126AQ9BYI3 521 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms