RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 KIAA1524Q8TCG1 905 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 KRT35Q92764 455 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 IMP4Q96G21 291 aaKnown RBP12.85□□□□□ -0.35
CHMP3-208ENST00000486404 QKIQ96PU8 341 aaKnown RBP eCLIP12.85□□□□□ -0.352e-7■■■■□ 25.7
CHMP3-208ENST00000486404 CCDC3Q9BQI4 270 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 FERMT1Q9BQL6 677 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 MLPHQ9BV36 600 aaPredicted RBP12.85□□□□□ -0.35
CHMP3-208ENST00000486404 GSDMCQ9BYG8 508 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 CDH19Q9H159 772 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 SLC25A51Q9H1U9 297 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 IMPACTQ9P2X3 320 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 SAE1Q9UBE0 346 aaPredicted RBP12.85□□□□□ -0.35
CHMP3-208ENST00000486404 DKK4Q9UBT3 224 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 PKD1L2Q7Z442 2459 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 WDFY3Q8IZQ1 3526 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 CLDN7O95471 211 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 PTPN3P26045 913 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 BIRC2Q13490 618 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 SPIDRQ14159 915 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 SLC14A2Q15849 920 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 QPCTQ16769 361 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 PERM1Q5SV97 790 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 ADAMTSL4Q6UY14 1074 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 TECPR1Q7Z6L1 1165 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 CACTIN-AS1Q8N1I8 211 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 FAM46DQ8NEK8 389 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 OR6C4Q8NGE1 309 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 SCAMP4Q969E2 229 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 CCDC74AQ96AQ1 378 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 LYSMD1Q96S90 227 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 RIOK2Q9BVS4 552 aaKnown RBP12.84□□□□□ -0.35
CHMP3-208ENST00000486404 HEMGNQ9BXL5 484 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 FRMD8Q9BZ67 464 aaPredicted RBP12.84□□□□□ -0.35
CHMP3-208ENST00000486404 NRSN2Q9GZP1 204 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 TMEM168Q9H0V1 697 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 ABCG8Q9H221 673 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 DPEP2Q9H4A9 486 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 GLOD4Q9HC38 313 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 SUFUQ9UMX1 484 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 RAXQ9Y2V3 346 aa12.84□□□□□ -0.35
CHMP3-208ENST00000486404 FREM2Q5SZK8 3169 aa12.83□□□□□ -0.35
CHMP3-208ENST00000486404 CCDC66A2RUB6 948 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 RCCD1A6NED2 376 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 BTNL10A8MVZ5 291 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 HACD1B0YJ81 288 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 ANKRD66B4E2M5 251 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 H7C0C1 242 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 APOC4-APOC2K7ER74 178 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 INPP4BO15327 924 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 PMPCBO75439 489 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 TCEA3O75764 348 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 STK10O94804 968 aaKnown RBP12.83□□□□□ -0.36
CHMP3-208ENST00000486404 PRLP01236 227 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 APOC2P02655 101 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 ATP5OP48047 213 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 RWDD2BP57060 319 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 COPS2P61201 443 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 PTSQ03393 145 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 CDK18Q07002 472 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 KIF5AQ12840 1032 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 PEX6Q13608 980 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 IHHQ14623 411 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 TEX44Q53QW1 395 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 CDCP2Q5VXM1 449 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 RFLNAQ6ZTI6 216 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 BBS12Q6ZW61 710 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 LYSMD3Q7Z3D4 306 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 TRIM74Q86UV6 250 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 GALNT13Q8IUC8 556 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 CDKL3Q8IVW4 592 aaPredicted RBP12.83□□□□□ -0.36
CHMP3-208ENST00000486404 RAVER1Q8IY67 606 aaKnown RBP12.83□□□□□ -0.36
CHMP3-208ENST00000486404 SYCE1Q8N0S2 351 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 HIC2Q96JB3 615 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 DCBLD2Q96PD2 775 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 OR2M4Q96R27 311 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 VAT1Q99536 393 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 DESI2Q9BSY9 194 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 GPR63Q9BZJ6 419 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 RAD18Q9NS91 495 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 REXO2Q9Y3B8 237 aaKnown RBP12.83□□□□□ -0.36
CHMP3-208ENST00000486404 ZNF711Q9Y462 761 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 PCDHB1Q9Y5F3 818 aa12.83□□□□□ -0.36
CHMP3-208ENST00000486404 RGSL1A5PLK6 1076 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 F5H423 210 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-208ENST00000486404 PJA2O43164 708 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 BRINP1O60477 761 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 USP12O75317 370 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 ASMTLO95671 621 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 NDST3O95803 873 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 MT-CYBP00156 380 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-208ENST00000486404 CEACAM5P06731 702 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 IVLP07476 585 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 PIRTP0C851 137 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 NFKB1P19838 968 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 POLD2P49005 469 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 SPINT3P49223 89 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 GABREP78334 506 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 ADCY2Q08462 1091 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 C14orf28Q4W4Y0 310 aa12.82□□□□□ -0.36
CHMP3-208ENST00000486404 ZNF569Q5MCW4 686 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms