RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 APOC4-APOC2K7ER74 178 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 KCNK1O00180 336 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 GAPDHSO14556 408 aaPredicted RBP5.73□□□□□ -1.49
CUX1-208ENST00000485792 SCAMP1O15126 338 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 SLC31A1O15431 190 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 FLRT2O43155 660 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 ARHGAP6O43182 974 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 SH3BP5O60239 455 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 MAGEC1O60732 1142 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 MMP20O60882 483 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 TRBC1P01850 177 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 APOC2P02655 101 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 CSF2P04141 144 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 KRT1P04264 644 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 C1SP09871 688 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 ALPIP09923 528 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 FAM157BP0CG42 384 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 TGM2P21980 687 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 EPHA8P29322 1005 aaPredicted RBP5.73□□□□□ -1.49
CUX1-208ENST00000485792 SCNN1BP51168 640 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 DNA2P51530 1060 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 DPTQ07507 201 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 BCL2L1Q07817 233 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 EIF2B5Q13144 721 aaKnown RBP5.73□□□□□ -1.49
CUX1-208ENST00000485792 ZNF211Q13398 564 aaPredicted RBP5.73□□□□□ -1.49
CUX1-208ENST00000485792 TFDP2Q14188 446 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 FZD2Q14332 565 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 KRT81Q14533 505 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 PDK1Q15118 436 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 IRF4Q15306 451 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 CNGA3Q16281 694 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 WSCD2Q2TBF2 565 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 TEX44Q53QW1 395 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 PPM1JQ5JR12 505 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 N4BP2L1Q5TBK1 243 aaPredicted RBP5.73□□□□□ -1.49
CUX1-208ENST00000485792 ESRP1Q6NXG1 681 aaKnown RBP5.73□□□□□ -1.49
CUX1-208ENST00000485792 RAB44Q7Z6P3 723 aaPredicted RBP5.73□□□□□ -1.49
CUX1-208ENST00000485792 PRUNE1Q86TP1 453 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 GATAD2AQ86YP4 633 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 CCDC13Q8IYE1 715 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 RBFAQ8N0V3 343 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 CACTIN-AS1Q8N1I8 211 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 OXR1Q8N573 874 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 FAM181AQ8N9Y4 354 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 GLIS1Q8NBF1 620 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 DEFB124Q8NES8 71 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 KIAA1524Q8TCG1 905 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 DTX3LQ8TDB6 740 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 GANCQ8TET4 914 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 HAUS1Q96CS2 278 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 KLHDC7BQ96G42 594 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 PDXPQ96GD0 296 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 OXNAD1Q96HP4 312 aaPredicted RBP5.73□□□□□ -1.49
CUX1-208ENST00000485792 TEKT5Q96M29 485 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 AGAP2Q99490 1192 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 SEMA3CQ99985 751 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 C19orf43Q9BQ61 176 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 CINPQ9BW66 212 aaPredicted RBP5.73□□□□□ -1.49
CUX1-208ENST00000485792 TDRD1Q9BXT4 1180 aaKnown RBP5.73□□□□□ -1.49
CUX1-208ENST00000485792 POLR1EQ9GZS1 481 aaKnown RBP5.73□□□□□ -1.49
CUX1-208ENST00000485792 MIR1-1HGQ9H1L0 117 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 SLC25A51Q9H1U9 297 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 USP29Q9HBJ7 922 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 DYRK4Q9NR20 520 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 RBM22Q9NW64 420 aaKnown RBP eCLIP5.73□□□□□ -1.49
CUX1-208ENST00000485792 KCTD5Q9NXV2 234 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 NFKBIL1Q9UBC1 381 aaPredicted RBP5.73□□□□□ -1.49
CUX1-208ENST00000485792 TMPRSS11EQ9UL52 423 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 PCDHGC4Q9Y5F7 938 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 SPO11Q9Y5K1 396 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 CSNK1G3Q9Y6M4 447 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 FER1L5A0AVI2 2057 aa5.73□□□□□ -1.49
CUX1-208ENST00000485792 SDK2Q58EX2 2172 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 A6NNZ2 444 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 MIF4GDA9UHW6 222 aaKnown RBP5.72□□□□□ -1.49
CUX1-208ENST00000485792 HACD1B0YJ81 288 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 ANKRD66B4E2M5 251 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 TRIM38O00635 465 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 APOL1O14791 398 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 TNFRSF10CO14798 259 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 AURKAO14965 403 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 ATXN7O15265 892 aaPredicted RBP5.72□□□□□ -1.49
CUX1-208ENST00000485792 EFSO43281 561 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 CST8O60676 142 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 SDC3O75056 442 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 PIAS2O75928 621 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 TM7SF2O76062 418 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 HEXIM1O94992 359 aaKnown RBP5.72□□□□□ -1.49
CUX1-208ENST00000485792 PCDH8O95206 1070 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 FTCDO95954 541 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 EPOP01588 193 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 JCHAINP01591 159 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 ATXN1LP0C7T5 689 aaKnown RBP5.72□□□□□ -1.49
CUX1-208ENST00000485792 THEGLP0DJG4 465 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 PYGMP11217 842 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 C6P13671 934 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 NME1P15531 152 aaKnown RBP5.72□□□□□ -1.49
CUX1-208ENST00000485792 DGKAP23743 735 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 PSMA3P25788 255 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 PTPN3P26045 913 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms