RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-240	ENST00000484412	TRAM1L1	Q8N609	369 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	OR56A4	Q8NGH8	313 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	OR2I1P	Q8NGU4	316 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	RHBDD1	Q8TEB9	315 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	WDR92	Q96MX6	357 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	VPS35	Q96QK1	796 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	SMIM14	Q96QK8	99 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	FAM118B	Q9BPY3	351 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	ZSCAN5A	Q9BUG6	496 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	LRRC40	Q9H9A6	602 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	RIMKLB	Q9ULI2	386 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	SLC17A4	Q9Y2C5	497 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	NEU2	Q9Y3R4	380 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	ZNF711	Q9Y462	761 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	GPR89A	B7ZAQ6	455 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412		H7C0S8	307 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	RASGRP1	O95267	797 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	TNF	P01375	233 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	TUBB4A	P04350	444 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	CEACAM5	P06731	702 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	GPR89B	P0CG08	455 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	MAGEA6	P43360	314 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	GNG11	P61952	73 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	CDK3	Q00526	305 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	PCSK7	Q16549	785 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	PRAMEF14	Q5SWL7	426 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	OGFOD3	Q6PK18	319 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	ENPP7	Q6UWV6	458 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	LYSMD3	Q7Z3D4	306 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	NAXD	Q8IW45	347 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	CACTIN-AS1	Q8N1I8	211 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	PELI3	Q8N2H9	469 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	FSTL5	Q8N475	847 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	IPMK	Q8NFU5	416 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	OR4C6	Q8NH72	309 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	SLCO2A1	Q92959	643 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	PEX13	Q92968	403 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	SCAMP4	Q969E2	229 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	HIC2	Q96JB3	615 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	LGR4	Q9BXB1	951 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	FSD1L	Q9BXM9	530 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	GPR63	Q9BZJ6	419 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	RMI1	Q9H9A7	625 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	ETNK1	Q9HBU6	452 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	EIF2B3	Q9NR50	452 aa	Known RBP	13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	VPS18	Q9P253	973 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	SPAST	Q9UBP0	616 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	PCDHGA1	Q9Y5H4	931 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	SAR1B	Q9Y6B6	198 aa		13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.9	□□□□□ -0.18	4e-6	■■■□□ 15.5
HDLBP-240	ENST00000484412	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-240	ENST00000484412	FRYL	O94915	3013 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	DCDC2B	A2VCK2	349 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	FAM221B	A6H8Z2	402 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412		K7ESM1	405 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	PGRMC1	O00264	195 aa	Known RBP	13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	TNFSF14	O43557	240 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	FUCA1	P04066	466 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	IVL	P07476	585 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	BPI	P17213	487 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	LPO	P22079	712 aa	Predicted RBP	13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	RPL22	P35268	128 aa	Known RBP	13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	GPR1	P46091	355 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	SRP54	P61011	504 aa	Known RBP	13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	ILK	Q13418	452 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	LAMB3	Q13751	1172 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	TRIP6	Q15654	476 aa	Known RBP	13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	FAM182A	Q5T1J6	154 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	DGLUCY	Q7Z3D6	616 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	KDELC2	Q7Z4H8	507 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	CREG2	Q8IUH2	290 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	GPR26	Q8NDV2	337 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	COG1	Q8WTW3	980 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	ATG4A	Q8WYN0	398 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	SGSM3	Q96HU1	749 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	MYOC	Q99972	504 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	TBL1Y	Q9BQ87	522 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	RIOK2	Q9BVS4	552 aa	Known RBP	13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	WDR26	Q9H7D7	661 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	TRIM39	Q9HCM9	518 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	NLGN3	Q9NZ94	848 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	NCKIPSD	Q9NZQ3	722 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	SPO11	Q9Y5K1	396 aa		13.89	□□□□□ -0.19
HDLBP-240	ENST00000484412	TMEM202	A6NGA9	273 aa		13.88	□□□□□ -0.19
HDLBP-240	ENST00000484412	C2orf81	A6NN90	581 aa		13.88	□□□□□ -0.19
HDLBP-240	ENST00000484412	LMO7DN	F2Z398	122 aa		13.88	□□□□□ -0.19
HDLBP-240	ENST00000484412	AURKA	O14965	403 aa		13.88	□□□□□ -0.19
HDLBP-240	ENST00000484412	TRIM16	O95361	564 aa		13.88	□□□□□ -0.19
HDLBP-240	ENST00000484412	CRTAM	O95727	393 aa		13.88	□□□□□ -0.19
HDLBP-240	ENST00000484412	PCCB	P05166	539 aa		13.88	□□□□□ -0.19
HDLBP-240	ENST00000484412	JUND	P17535	347 aa		13.88	□□□□□ -0.19
HDLBP-240	ENST00000484412	COIL	P38432	576 aa	Predicted RBP	13.88	□□□□□ -0.19
HDLBP-240	ENST00000484412	CHRNA4	P43681	627 aa		13.88	□□□□□ -0.19
HDLBP-240	ENST00000484412	FNTA	P49354	379 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms