RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 CLEC14AQ86T13 490 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 CCDC50Q8IVM0 306 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 CCNYQ8ND76 341 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 WDR48Q8TAF3 677 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 CXorf40AQ8TE69 158 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 EXTL1Q92935 676 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 ALS2CR12Q96Q35 445 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 DESI2Q9BSY9 194 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 LRRC61Q9BV99 259 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 FOXP3Q9BZS1 431 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 CLPBQ9H078 707 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 RBM22Q9NW64 420 aaKnown RBP eCLIP10.02□□□□□ -0.812e-6■■□□□ 13.7
CPSF4-213ENST00000484112 IL17BQ9UHF5 180 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 DNPEPQ9ULA0 475 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 PNMA8BQ9ULN7 279 aaPredicted RBP10.02□□□□□ -0.81
CPSF4-213ENST00000484112 PHTF1Q9UMS5 762 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 RPL26L1Q9UNX3 145 aaKnown RBP10.02□□□□□ -0.81
CPSF4-213ENST00000484112 ATP8A1Q9Y2Q0 1164 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 HYOU1Q9Y4L1 999 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 HEY1Q9Y5J3 304 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 TRPM6Q9BX84 2022 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 COL6A6A6NMZ7 2263 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 ASH1LQ9NR48 2969 aaKnown RBP10.01□□□□□ -0.81
CPSF4-213ENST00000484112 LMO7DNF2Z398 122 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 PLD2O14939 933 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 TM7SF2O76062 418 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 PIGNO95427 931 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 RPLP0P05388 317 aaKnown RBP10.01□□□□□ -0.81
CPSF4-213ENST00000484112 CTSEP14091 401 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 TIMP2P16035 220 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 UGT1A5P35504 534 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 IGFALSP35858 605 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 MLLT3P42568 568 aaPredicted RBP10.01□□□□□ -0.81
CPSF4-213ENST00000484112 RGRP47804 291 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 CCL7P80098 99 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 CCZ1BP86790 482 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 CCZ1P86791 482 aaPredicted RBP10.01□□□□□ -0.81
CPSF4-213ENST00000484112 PRKD1Q15139 912 aaPredicted RBP10.01□□□□□ -0.81
CPSF4-213ENST00000484112 CAMK1DQ8IU85 385 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 SDR16C5Q8N3Y7 309 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 PGBD5Q8N414 524 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 TTC13Q8NBP0 860 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 TFB1MQ8WVM0 346 aaKnown RBP10.01□□□□□ -0.81
CPSF4-213ENST00000484112 SCG3Q8WXD2 468 aaKnown RBP10.01□□□□□ -0.81
CPSF4-213ENST00000484112 KRT35Q92764 455 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 CCDC74AQ96AQ1 378 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 CENPTQ96BT3 561 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 HAUS1Q96CS2 278 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 HES6Q96HZ4 224 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 GFM1Q96RP9 751 aaKnown RBP10.01□□□□□ -0.81
CPSF4-213ENST00000484112 OSBPL8Q9BZF1 889 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 STRADBQ9C0K7 418 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 GOLPH3Q9H4A6 298 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 NOD2Q9HC29 1040 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 MBNL1Q9NR56 388 aaKnown RBP10.01□□□□□ -0.81
CPSF4-213ENST00000484112 PISDQ9UG56 409 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 RABGEF1Q9UJ41 708 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 ATXN7L1Q9ULK2 861 aaPredicted RBP10.01□□□□□ -0.81
CPSF4-213ENST00000484112 PPIL1Q9Y3C6 166 aa10.01□□□□□ -0.81
CPSF4-213ENST00000484112 GOLGA6L9A6NEM1 432 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 PSMD11O00231 422 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 NTN3O00634 580 aaPredicted RBP10□□□□□ -0.81
CPSF4-213ENST00000484112 FZD6O60353 706 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 JMJD7P0C870 316 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 CYP2A6P11509 494 aaPredicted RBP10□□□□□ -0.81
CPSF4-213ENST00000484112 ITIH2P19823 946 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 MMP12P39900 470 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 INHBCP55103 352 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 ITKQ08881 620 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 AP1B1Q10567 949 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 TEX44Q53QW1 395 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 ARMC12Q5T9G4 340 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 DPPA4Q7L190 304 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 HID1Q8IV36 788 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 ARL10Q8N8L6 244 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 Q8N9G6 341 aaPredicted RBP10□□□□□ -0.81
CPSF4-213ENST00000484112 KYQ8NBH2 561 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 NETO2Q8NC67 525 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 TRIM58Q8NG06 486 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 TSACCQ96A04 125 aaPredicted RBP10□□□□□ -0.81
CPSF4-213ENST00000484112 SGF29Q96ES7 293 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 SCRN2Q96FV2 425 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 LIN37Q96GY3 246 aaPredicted RBP10□□□□□ -0.81
CPSF4-213ENST00000484112 PPP1R2P1Q96PQ5 205 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 SRPK1Q96SB4 655 aaKnown RBP10□□□□□ -0.81
CPSF4-213ENST00000484112 SEMA3CQ99985 751 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 WRAP53Q9BUR4 548 aaKnown RBP10□□□□□ -0.81
CPSF4-213ENST00000484112 NT5MQ9NPB1 228 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 PCDH12Q9NPG4 1184 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 TRHDEQ9UKU6 1024 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 GPR34Q9UPC5 381 aa10□□□□□ -0.81
CPSF4-213ENST00000484112 TMX2-CTNND1H3BSU7 103 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 NOBOXO60393 691 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 PGLSO95336 258 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 CPP00450 1065 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 JCHAINP01591 159 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 HLA-DQB2P05538 268 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 FAM87AP0C7U9 286 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 MARCKSL1P49006 195 aa9.99□□□□□ -0.81
CPSF4-213ENST00000484112 BLKP51451 505 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms