RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 MRPL57Q9BQC6 102 aaKnown RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 EBF3Q9H4W6 596 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 ZNF395Q9H8N7 513 aaPredicted RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 ZFP14Q9HCL3 533 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 ELOVL2Q9NXB9 296 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 MED16Q9Y2X0 877 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 WASF2Q9Y6W5 498 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 DOCK8Q8NF50 2099 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 C1orf232A0A0U1RR37 186 aa14□□□□□ -0.17
CLK3-204ENST00000483723 TTC34A8MYJ7 566 aa14□□□□□ -0.17
CLK3-204ENST00000483723 PFDN6O15212 129 aa14□□□□□ -0.17
CLK3-204ENST00000483723 DNAJC6O75061 913 aa14□□□□□ -0.17
CLK3-204ENST00000483723 SLC6A11P48066 632 aa14□□□□□ -0.17
CLK3-204ENST00000483723 KPNA2P52292 529 aaKnown RBP14□□□□□ -0.17
CLK3-204ENST00000483723 OVGP1Q12889 678 aa14□□□□□ -0.17
CLK3-204ENST00000483723 FAM83EQ2M2I3 478 aa14□□□□□ -0.17
CLK3-204ENST00000483723 TECRLQ5HYJ1 363 aa14□□□□□ -0.17
CLK3-204ENST00000483723 AARS2Q5JTZ9 985 aaKnown RBP14□□□□□ -0.17
CLK3-204ENST00000483723 ATAT1Q5SQI0 421 aa14□□□□□ -0.17
CLK3-204ENST00000483723 AGAP9Q5VTM2 703 aa14□□□□□ -0.17
CLK3-204ENST00000483723 CERS6Q6ZMG9 384 aa14□□□□□ -0.17
CLK3-204ENST00000483723 ATG14Q6ZNE5 492 aa14□□□□□ -0.17
CLK3-204ENST00000483723 ZCCHC23Q6ZST2 131 aa14□□□□□ -0.17
CLK3-204ENST00000483723 PHTF2Q8N3S3 785 aa14□□□□□ -0.17
CLK3-204ENST00000483723 RFWD2Q8NHY2 731 aa14□□□□□ -0.17
CLK3-204ENST00000483723 ANKRD49Q8WVL7 239 aa14□□□□□ -0.17
CLK3-204ENST00000483723 LRIG1Q96JA1 1093 aa14□□□□□ -0.17
CLK3-204ENST00000483723 RMDN2Q96LZ7 410 aa14□□□□□ -0.17
CLK3-204ENST00000483723 BIRC8Q96P09 236 aa14□□□□□ -0.17
CLK3-204ENST00000483723 MRPL46Q9H2W6 279 aaKnown RBP14□□□□□ -0.17
CLK3-204ENST00000483723 ZDHHC6Q9H6R6 413 aa14□□□□□ -0.17
CLK3-204ENST00000483723 BRD9Q9H8M2 597 aa14□□□□□ -0.17
CLK3-204ENST00000483723 GPAMQ9HCL2 828 aa14□□□□□ -0.17
CLK3-204ENST00000483723 LMCD1Q9NZU5 365 aa14□□□□□ -0.17
CLK3-204ENST00000483723 CLEC1BQ9P126 229 aa14□□□□□ -0.17
CLK3-204ENST00000483723 SLC8A2Q9UPR5 921 aa14□□□□□ -0.17
CLK3-204ENST00000483723 KIAA1549LQ6ZVL6 1849 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 TRBV5-4A0A0C4DH59 114 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 NPIPB15A6NHN6 443 aaPredicted RBP13.99□□□□□ -0.17
CLK3-204ENST00000483723 AGAP14A8MT82 685 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 PRRT4C9JH25 899 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 TK2O00142 265 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 ITM2AO43736 263 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 H2AFYO75367 372 aaKnown RBP13.99□□□□□ -0.17
CLK3-204ENST00000483723 SLC4A1P02730 911 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 UGT2B4P06133 528 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 CCDC166P0CW27 439 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 MYL2P10916 166 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 BPIP17213 487 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 PTGER3P43115 390 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 RECQLP46063 649 aaPredicted RBP13.99□□□□□ -0.17
CLK3-204ENST00000483723 SLC1A6P48664 564 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 POLR2LP62875 67 aaKnown RBP13.99□□□□□ -0.17
CLK3-204ENST00000483723 ITGA9Q13797 1035 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 CSHL1Q14406 222 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 ACAP2Q15057 778 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 GALNTL6Q49A17 601 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 ZRANB3Q5FWF4 1079 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 BRAT1Q6PJG6 821 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 CRLF3Q8IUI8 442 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 KLHL32Q96NJ5 620 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 MYADMQ96S97 322 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 SORT1Q99523 831 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 NPHS2Q9NP85 383 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 CPSF2Q9P2I0 782 aaKnown RBP13.99□□□□□ -0.17
CLK3-204ENST00000483723 DKK3Q9UBP4 350 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 APPL1Q9UKG1 709 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 COMMD10Q9Y6G5 202 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 SLC30A1Q9Y6M5 507 aa13.99□□□□□ -0.17
CLK3-204ENST00000483723 LAMA2P24043 3122 aaKnown RBP13.99□□□□□ -0.17
CLK3-204ENST00000483723 TMEM114B3SHH9 223 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 BNIP3LO60238 219 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 DLX3O60479 287 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 SRP72O76094 671 aaKnown RBP13.98□□□□□ -0.17
CLK3-204ENST00000483723 RBP1P09455 135 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 PKMP14618 531 aaKnown RBP13.98□□□□□ -0.17
CLK3-204ENST00000483723 FMO4P31512 558 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 ARRB2P32121 409 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 GLRBP48167 497 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 ABCE1P61221 599 aaKnown RBP13.98□□□□□ -0.17
CLK3-204ENST00000483723 PFKPQ01813 784 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 PTSQ03393 145 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 CCDC15Q0P6D6 951 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 MESP2Q0VG99 397 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 EIF4HQ15056 248 aaKnown RBP13.98□□□□□ -0.17
CLK3-204ENST00000483723 CTC1Q2NKJ3 1217 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 LIPMQ5VYY2 423 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 GRAMD4Q6IC98 578 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 CCDC121Q6ZUS5 278 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 USP45Q70EL2 814 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 TSPAN33Q86UF1 283 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 STK40Q8N2I9 435 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 PPP1R14CQ8TAE6 165 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 THOC1Q96FV9 657 aaKnown RBP13.98□□□□□ -0.17
CLK3-204ENST00000483723 SCYL1Q96KG9 808 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 GATA5Q9BWX5 397 aaPredicted RBP13.98□□□□□ -0.17
CLK3-204ENST00000483723 OSBPL1AQ9BXW6 950 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 PLA2G2FQ9BZM2 168 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 CIPCQ9C0C6 399 aa13.98□□□□□ -0.17
CLK3-204ENST00000483723 P2RY12Q9H244 342 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms