RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 PRSS53Q2L4Q9 553 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 MDH1BQ5I0G3 518 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 SPANXN3Q5MJ09 141 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 BRMS1LQ5PSV4 323 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 HECTD3Q5T447 861 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 FAM171BQ6P995 826 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 DCLRE1AQ6PJP8 1040 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 KYAT3Q6YP21 454 aaKnown RBP7.8□□□□□ -1.16
SNX13-208ENST00000482558 ATG14Q6ZNE5 492 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 LINC00523Q86TU6 105 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 OSTM1Q86WC4 334 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 CTAGE3PQ8IX95 158 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 C4orf33Q8N1A6 199 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 ARHGAP18Q8N392 663 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 PRR18Q8N4B5 295 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 CCDC185Q8N715 623 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 CFAP61Q8NHU2 1237 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 TCP10LQ8TDR4 215 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 ASB12Q8WXK4 309 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 INPP5DQ92835 1189 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 STAMBPL1Q96FJ0 436 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 SIGLEC10Q96LC7 697 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 TMEM237Q96Q45 408 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 HDAC8Q9BY41 377 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 GPR62Q9BZJ7 368 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 SLC40A1Q9NP59 571 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 DMAP1Q9NPF5 467 aaPredicted RBP7.8□□□□□ -1.16
SNX13-208ENST00000482558 GPATCH2LQ9NWQ4 482 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 MOCS1Q9NZB8 636 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 ADAM28Q9UKQ2 775 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 MTO1Q9Y2Z2 717 aaKnown RBP7.8□□□□□ -1.16
SNX13-208ENST00000482558 A0A087X0M5 115 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 A0A1B0GX30 115 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 A0A1W2PPM1 405 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 TCAF2A6NFQ2 919 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 ANKRD65E5RJM6 399 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 H3BS24 57 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 RNF103O00237 685 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 CLGNO14967 610 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 DCLK1O15075 740 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 FGF10O15520 208 aaPredicted RBP7.79□□□□□ -1.16
SNX13-208ENST00000482558 MGRN1O60291 552 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 TMEM127O75204 238 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 NDUFS2O75306 463 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 FGF18O76093 207 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 UNC5CO95185 931 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 DNTTP04053 509 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 SRGAP2BP0DMP2 458 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 SLC2A3P11169 496 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 NEFHP12036 1026 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 GOT1P17174 413 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 DNAJB1P25685 340 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 HOXD10P28358 340 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 TKTP29401 623 aaKnown RBP7.79□□□□□ -1.16
SNX13-208ENST00000482558 FOXN2P32314 431 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 MLH1P40692 756 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 POLD2P49005 469 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 NPY2RP49146 381 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 CXCR3P49682 368 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 MAP3K7CLP57077 242 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 TPI1P60174 286 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 ALDH6A1Q02252 535 aaKnown RBP7.79□□□□□ -1.16
SNX13-208ENST00000482558 PPIDQ08752 370 aaKnown RBP7.79□□□□□ -1.16
SNX13-208ENST00000482558 SEMA3BQ13214 749 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 TBCCQ15814 346 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 KCTD19Q17RG1 926 aaPredicted RBP7.79□□□□□ -1.16
SNX13-208ENST00000482558 FAM205BPQ63HN1 556 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 CWF19L1Q69YN2 538 aaKnown RBP7.79□□□□□ -1.16
SNX13-208ENST00000482558 CYB5D1Q6P9G0 228 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 SH2D5Q6ZV89 423 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 PAQR9Q6ZVX9 377 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 MARK2Q7KZI7 788 aaKnown RBP7.79□□□□□ -1.16
SNX13-208ENST00000482558 OVCH1Q7RTY7 1134 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 HEATR4Q86WZ0 1026 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 FAM131BQ86XD5 332 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 PPM1NQ8N819 430 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 COLGALT1Q8NBJ5 622 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 ARRDC4Q8NCT1 418 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 GABPB2Q8TAK5 448 aaPredicted RBP7.79□□□□□ -1.16
SNX13-208ENST00000482558 CCDC110Q8TBZ0 833 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 DEPDC1BQ8WUY9 529 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 KLHL29Q96CT2 875 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 HDAC11Q96DB2 347 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 CFAP36Q96G28 342 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 P2RY11Q96G91 374 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 PCED1BQ96HM7 432 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 C7orf26Q96N11 449 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 ASB2Q96Q27 587 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 HAPLN3Q96S86 360 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 GAD1Q99259 594 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 WDR83Q9BRX9 315 aaKnown RBP7.79□□□□□ -1.16
SNX13-208ENST00000482558 LRFN3Q9BTN0 628 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 COLEC11Q9BWP8 271 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 TSSK1BQ9BXA7 367 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 ULBP1Q9BZM6 244 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 MAGEH1Q9H213 219 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 STN1Q9H668 368 aaKnown RBP7.79□□□□□ -1.16
SNX13-208ENST00000482558 WDCPQ9H6R7 721 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 C10orf88Q9H8K7 445 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 ECT2Q9H8V3 914 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms